Gene : Phvul.008G131000 P. vulgaris v2.1
Defline:  (1 of 3) K14819 - dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] (DUSP12, YVH1) Genomic Order:  1318
Name:  ? Phvul.008G131000 Secondary Identifier:  ? PAC:37158547
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G131000 0.5kb upstream 0.5kb upstream 2278 true Chr08: 21342031-21344308 Phaseolus vulgaris
Phvul.008G131000 0.5kb upstream 0.5kb upstream 500 false Chr08: 21343809-21344308 Phaseolus vulgaris
Phvul.008G131000 0.5kb downstream 0.5kb downstream 2278 true Chr08: 21341531-21343808 Phaseolus vulgaris
Phvul.008G131000 0.5kb downstream 0.5kb downstream 500 false Chr08: 21341531-21342030 Phaseolus vulgaris
Phvul.008G131000 1.0kb upstream 1.0kb upstream 2778 true Chr08: 21342031-21344808 Phaseolus vulgaris
Phvul.008G131000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21343809-21344808 Phaseolus vulgaris
Phvul.008G131000 1.0kb downstream 1.0kb downstream 2778 true Chr08: 21341031-21343808 Phaseolus vulgaris
Phvul.008G131000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21341031-21342030 Phaseolus vulgaris
Phvul.008G131000 2.0kb upstream 2.0kb upstream 3778 true Chr08: 21342031-21345808 Phaseolus vulgaris
Phvul.008G131000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21343809-21345808 Phaseolus vulgaris
Phvul.008G131000 2.0kb downstream 2.0kb downstream 3778 true Chr08: 21340031-21343808 Phaseolus vulgaris
Phvul.008G131000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21340031-21342030 Phaseolus vulgaris
Phvul.008G131000 5.0kb upstream 5.0kb upstream 6778 true Chr08: 21342031-21348808 Phaseolus vulgaris
Phvul.008G131000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21343809-21348808 Phaseolus vulgaris
Phvul.008G131000 5.0kb downstream 5.0kb downstream 6778 true Chr08: 21337031-21343808 Phaseolus vulgaris
Phvul.008G131000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21337031-21342030 Phaseolus vulgaris
Phvul.008G131000 10.0kb upstream 10.0kb upstream 11778 true Chr08: 21342031-21353808 Phaseolus vulgaris
Phvul.008G131000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21343809-21353808 Phaseolus vulgaris
Phvul.008G131000 10.0kb downstream 10.0kb downstream 11778 true Chr08: 21332031-21343808 Phaseolus vulgaris
Phvul.008G131000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21332031-21342030 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028012 5273 Angiosperm View MSA
122297660 5265 Fabidae View MSA
124050385 5270 Rosid View MSA
123750058 5271 Pentapetalae View MSA
122788963 5272 Eudicot View MSA
121297567 5274 Embryophyte View MSA
123335609 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.947931 0.0 3.54108    
cufflinks 1.23341 0.0 4.51576    
cufflinks 0.0747989 0.0 0.349364 Low Low
cufflinks 1.18027 0.0 4.35886    
cufflinks 0.54705 0.0 2.15387 Low  
cufflinks 0.332856 0.0 1.35264 Low  
cufflinks 0.898488 0.0 3.37043    
cufflinks 1.57855 0.0 5.60272    
cufflinks 0.684371 0.0 2.62961    
cufflinks 0.976988 0.0 3.65735    
cufflinks 0.964161 0.0 3.61636    

0 Strain