Gene : Phvul.008G133400 P. vulgaris v2.1
Defline:  (1 of 2) PF02068 - Plant PEC family metallothionein (Metallothio_PEC) Genomic Order:  1347
Name:  ? Phvul.008G133400 Secondary Identifier:  ? PAC:37158845
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G133400 0.5kb upstream 0.5kb upstream 1229 true Chr08: 22184645-22185873 Phaseolus vulgaris
Phvul.008G133400 0.5kb upstream 0.5kb upstream 500 false Chr08: 22184645-22185144 Phaseolus vulgaris
Phvul.008G133400 0.5kb downstream 0.5kb downstream 1229 true Chr08: 22185145-22186373 Phaseolus vulgaris
Phvul.008G133400 0.5kb downstream 0.5kb downstream 500 false Chr08: 22185874-22186373 Phaseolus vulgaris
Phvul.008G133400 1.0kb upstream 1.0kb upstream 1729 true Chr08: 22184145-22185873 Phaseolus vulgaris
Phvul.008G133400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22184145-22185144 Phaseolus vulgaris
Phvul.008G133400 1.0kb downstream 1.0kb downstream 1729 true Chr08: 22185145-22186873 Phaseolus vulgaris
Phvul.008G133400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22185874-22186873 Phaseolus vulgaris
Phvul.008G133400 2.0kb upstream 2.0kb upstream 2729 true Chr08: 22183145-22185873 Phaseolus vulgaris
Phvul.008G133400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22183145-22185144 Phaseolus vulgaris
Phvul.008G133400 2.0kb downstream 2.0kb downstream 2729 true Chr08: 22185145-22187873 Phaseolus vulgaris
Phvul.008G133400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22185874-22187873 Phaseolus vulgaris
Phvul.008G133400 5.0kb upstream 5.0kb upstream 5729 true Chr08: 22180145-22185873 Phaseolus vulgaris
Phvul.008G133400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22180145-22185144 Phaseolus vulgaris
Phvul.008G133400 5.0kb downstream 5.0kb downstream 5729 true Chr08: 22185145-22190873 Phaseolus vulgaris
Phvul.008G133400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22185874-22190873 Phaseolus vulgaris
Phvul.008G133400 10.0kb upstream 10.0kb upstream 10729 true Chr08: 22175145-22185873 Phaseolus vulgaris
Phvul.008G133400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22175145-22185144 Phaseolus vulgaris
Phvul.008G133400 10.0kb downstream 10.0kb downstream 10729 true Chr08: 22185145-22195873 Phaseolus vulgaris
Phvul.008G133400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22185874-22195873 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026261 5273 Angiosperm View MSA
122308422 5265 Fabidae View MSA
124050513 5270 Rosid View MSA
123739681 5271 Pentapetalae View MSA
122790496 5272 Eudicot View MSA
121296251 5274 Embryophyte View MSA
123334448 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.155354 0.0 0.715076 Low  
cufflinks 0.747857 0.0 2.97264   High
cufflinks 0.128012 0.0 0.597907 Low  
cufflinks 0.0594326 0.0 0.305253 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0863962 0.0 0.41964 Low  
cufflinks 0.157824 0.0 0.720559 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain