Gene : Phvul.008G134400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Genomic Order:  1359
Name:  ? Phvul.008G134400 Secondary Identifier:  ? PAC:37159818
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G134400 0.5kb upstream 0.5kb upstream 3938 true Chr08: 22578614-22582551 Phaseolus vulgaris
Phvul.008G134400 0.5kb upstream 0.5kb upstream 500 false Chr08: 22578614-22579113 Phaseolus vulgaris
Phvul.008G134400 0.5kb downstream 0.5kb downstream 3938 true Chr08: 22579114-22583051 Phaseolus vulgaris
Phvul.008G134400 0.5kb downstream 0.5kb downstream 500 false Chr08: 22582552-22583051 Phaseolus vulgaris
Phvul.008G134400 1.0kb upstream 1.0kb upstream 4438 true Chr08: 22578114-22582551 Phaseolus vulgaris
Phvul.008G134400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22578114-22579113 Phaseolus vulgaris
Phvul.008G134400 1.0kb downstream 1.0kb downstream 4438 true Chr08: 22579114-22583551 Phaseolus vulgaris
Phvul.008G134400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22582552-22583551 Phaseolus vulgaris
Phvul.008G134400 2.0kb upstream 2.0kb upstream 5438 true Chr08: 22577114-22582551 Phaseolus vulgaris
Phvul.008G134400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22577114-22579113 Phaseolus vulgaris
Phvul.008G134400 2.0kb downstream 2.0kb downstream 5438 true Chr08: 22579114-22584551 Phaseolus vulgaris
Phvul.008G134400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22582552-22584551 Phaseolus vulgaris
Phvul.008G134400 5.0kb upstream 5.0kb upstream 8438 true Chr08: 22574114-22582551 Phaseolus vulgaris
Phvul.008G134400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22574114-22579113 Phaseolus vulgaris
Phvul.008G134400 5.0kb downstream 5.0kb downstream 8438 true Chr08: 22579114-22587551 Phaseolus vulgaris
Phvul.008G134400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22582552-22587551 Phaseolus vulgaris
Phvul.008G134400 10.0kb upstream 10.0kb upstream 13438 true Chr08: 22569114-22582551 Phaseolus vulgaris
Phvul.008G134400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22569114-22579113 Phaseolus vulgaris
Phvul.008G134400 10.0kb downstream 10.0kb downstream 13438 true Chr08: 22579114-22592551 Phaseolus vulgaris
Phvul.008G134400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22582552-22592551 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
122312379 5265 Fabidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.76373 0.0 5.60531   Low
cufflinks 4.88201 0.0 13.8162    
cufflinks 4.31138 0.0 12.3152    
cufflinks 4.92429 0.0 14.0182    
cufflinks 5.85926 0.0 16.4163    
cufflinks 4.20789 0.0 12.0888    
cufflinks 6.58085 0.0 18.0903    
cufflinks 4.52838 0.0 12.8485    
cufflinks 4.4746 0.0 12.7417    
cufflinks 9.12576 0.0 24.5176   High
cufflinks 6.50604 0.0 18.0119    

0 Strain