Gene : Phvul.008G132450 P. vulgaris v2.1
Defline:  (1 of 2) K15161 - cyclin C (CCNC, SSN8) Genomic Order:  1331
Name:  ? Phvul.008G132450 Secondary Identifier:  ? PAC:37158967
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G132450 0.5kb upstream 0.5kb upstream 25748 true Chr08: 21664082-21689829 Phaseolus vulgaris
Phvul.008G132450 0.5kb upstream 0.5kb upstream 500 false Chr08: 21664082-21664581 Phaseolus vulgaris
Phvul.008G132450 0.5kb downstream 0.5kb downstream 25748 true Chr08: 21664582-21690329 Phaseolus vulgaris
Phvul.008G132450 0.5kb downstream 0.5kb downstream 500 false Chr08: 21689830-21690329 Phaseolus vulgaris
Phvul.008G132450 1.0kb upstream 1.0kb upstream 26248 true Chr08: 21663582-21689829 Phaseolus vulgaris
Phvul.008G132450 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21663582-21664581 Phaseolus vulgaris
Phvul.008G132450 1.0kb downstream 1.0kb downstream 26248 true Chr08: 21664582-21690829 Phaseolus vulgaris
Phvul.008G132450 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21689830-21690829 Phaseolus vulgaris
Phvul.008G132450 2.0kb upstream 2.0kb upstream 27248 true Chr08: 21662582-21689829 Phaseolus vulgaris
Phvul.008G132450 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21662582-21664581 Phaseolus vulgaris
Phvul.008G132450 2.0kb downstream 2.0kb downstream 27248 true Chr08: 21664582-21691829 Phaseolus vulgaris
Phvul.008G132450 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21689830-21691829 Phaseolus vulgaris
Phvul.008G132450 5.0kb upstream 5.0kb upstream 30248 true Chr08: 21659582-21689829 Phaseolus vulgaris
Phvul.008G132450 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21659582-21664581 Phaseolus vulgaris
Phvul.008G132450 5.0kb downstream 5.0kb downstream 30248 true Chr08: 21664582-21694829 Phaseolus vulgaris
Phvul.008G132450 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21689830-21694829 Phaseolus vulgaris
Phvul.008G132450 10.0kb upstream 10.0kb upstream 35248 true Chr08: 21654582-21689829 Phaseolus vulgaris
Phvul.008G132450 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21654582-21664581 Phaseolus vulgaris
Phvul.008G132450 10.0kb downstream 10.0kb downstream 35248 true Chr08: 21664582-21699829 Phaseolus vulgaris
Phvul.008G132450 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21689830-21699829 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308625 5265 Fabidae View MSA
124062296 5270 Rosid View MSA
123737404 5271 Pentapetalae View MSA
122789356 5272 Eudicot View MSA
122042556 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121346319 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9721 0.0 58.8846   High
cufflinks 6.46954 0.0 29.2639    
cufflinks 7.13697 0.0 31.2363    
cufflinks 11.7164 0.0 39.8562   High
cufflinks 4.57095 0.0 22.8732    
cufflinks 4.87795 0.0 24.7226    
cufflinks 3.52466 0.0 15.4244   Low
cufflinks 4.36688 0.0 21.4313    
cufflinks 4.96867 0.0 20.3455    
cufflinks 6.51316 0.0 30.2962    
cufflinks 4.66042 0.0 19.9163    

0 Strain