Gene : Phvul.008G134700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23089:SF7 - HIT FAMILY PROTEIN 1 Genomic Order:  1362
Name:  ? Phvul.008G134700 Secondary Identifier:  ? PAC:37159479
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G134700 0.5kb upstream 0.5kb upstream 5283 true Chr08: 22649492-22654774 Phaseolus vulgaris
Phvul.008G134700 0.5kb upstream 0.5kb upstream 500 false Chr08: 22654275-22654774 Phaseolus vulgaris
Phvul.008G134700 0.5kb downstream 0.5kb downstream 5283 true Chr08: 22648992-22654274 Phaseolus vulgaris
Phvul.008G134700 0.5kb downstream 0.5kb downstream 500 false Chr08: 22648992-22649491 Phaseolus vulgaris
Phvul.008G134700 1.0kb upstream 1.0kb upstream 5783 true Chr08: 22649492-22655274 Phaseolus vulgaris
Phvul.008G134700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22654275-22655274 Phaseolus vulgaris
Phvul.008G134700 1.0kb downstream 1.0kb downstream 5783 true Chr08: 22648492-22654274 Phaseolus vulgaris
Phvul.008G134700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22648492-22649491 Phaseolus vulgaris
Phvul.008G134700 2.0kb upstream 2.0kb upstream 6783 true Chr08: 22649492-22656274 Phaseolus vulgaris
Phvul.008G134700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22654275-22656274 Phaseolus vulgaris
Phvul.008G134700 2.0kb downstream 2.0kb downstream 6783 true Chr08: 22647492-22654274 Phaseolus vulgaris
Phvul.008G134700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22647492-22649491 Phaseolus vulgaris
Phvul.008G134700 5.0kb upstream 5.0kb upstream 9783 true Chr08: 22649492-22659274 Phaseolus vulgaris
Phvul.008G134700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22654275-22659274 Phaseolus vulgaris
Phvul.008G134700 5.0kb downstream 5.0kb downstream 9783 true Chr08: 22644492-22654274 Phaseolus vulgaris
Phvul.008G134700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22644492-22649491 Phaseolus vulgaris
Phvul.008G134700 10.0kb upstream 10.0kb upstream 14783 true Chr08: 22649492-22664274 Phaseolus vulgaris
Phvul.008G134700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22654275-22664274 Phaseolus vulgaris
Phvul.008G134700 10.0kb downstream 10.0kb downstream 14783 true Chr08: 22639492-22654274 Phaseolus vulgaris
Phvul.008G134700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22639492-22649491 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302528 5265 Fabidae View MSA
124050328 5270 Rosid View MSA
123747723 5271 Pentapetalae View MSA
122788071 5272 Eudicot View MSA
122049116 5273 Angiosperm View MSA
121311254 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.66705 0.0 35.7327    
cufflinks 6.69386 0.0 27.0087    
cufflinks 15.7611 0.0 60.0378   High
cufflinks 5.42749 0.0 22.7677    
cufflinks 4.31133 0.0 23.1424    
cufflinks 7.59016 0.0 29.5539    
cufflinks 4.02771 0.0 18.3818    
cufflinks 4.4346 0.0 23.9324    
cufflinks 4.2991 0.0 23.2995    
cufflinks 7.00602 0.0 33.8021    
cufflinks 3.46477 0.0 16.5399   Low

0 Strain