Gene : Phvul.008G266100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12668:SF0 - UPF0136 MEMBRANE PROTEIN CG5532 Genomic Order:  2674
Name:  ? Phvul.008G266100 Secondary Identifier:  ? PAC:37160815
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G266100 0.5kb upstream 0.5kb upstream 3358 true Chr08: 61157772-61161129 Phaseolus vulgaris
Phvul.008G266100 0.5kb upstream 0.5kb upstream 500 false Chr08: 61160630-61161129 Phaseolus vulgaris
Phvul.008G266100 0.5kb downstream 0.5kb downstream 3358 true Chr08: 61157272-61160629 Phaseolus vulgaris
Phvul.008G266100 0.5kb downstream 0.5kb downstream 500 false Chr08: 61157272-61157771 Phaseolus vulgaris
Phvul.008G266100 1.0kb upstream 1.0kb upstream 3858 true Chr08: 61157772-61161629 Phaseolus vulgaris
Phvul.008G266100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61160630-61161629 Phaseolus vulgaris
Phvul.008G266100 1.0kb downstream 1.0kb downstream 3858 true Chr08: 61156772-61160629 Phaseolus vulgaris
Phvul.008G266100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61156772-61157771 Phaseolus vulgaris
Phvul.008G266100 2.0kb upstream 2.0kb upstream 4858 true Chr08: 61157772-61162629 Phaseolus vulgaris
Phvul.008G266100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61160630-61162629 Phaseolus vulgaris
Phvul.008G266100 2.0kb downstream 2.0kb downstream 4858 true Chr08: 61155772-61160629 Phaseolus vulgaris
Phvul.008G266100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61155772-61157771 Phaseolus vulgaris
Phvul.008G266100 5.0kb upstream 5.0kb upstream 7858 true Chr08: 61157772-61165629 Phaseolus vulgaris
Phvul.008G266100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61160630-61165629 Phaseolus vulgaris
Phvul.008G266100 5.0kb downstream 5.0kb downstream 7858 true Chr08: 61152772-61160629 Phaseolus vulgaris
Phvul.008G266100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61152772-61157771 Phaseolus vulgaris
Phvul.008G266100 10.0kb upstream 10.0kb upstream 12858 true Chr08: 61157772-61170629 Phaseolus vulgaris
Phvul.008G266100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61160630-61170629 Phaseolus vulgaris
Phvul.008G266100 10.0kb downstream 10.0kb downstream 12858 true Chr08: 61147772-61160629 Phaseolus vulgaris
Phvul.008G266100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61147772-61157771 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312511 5265 Fabidae View MSA
124062826 5270 Rosid View MSA
123744265 5271 Pentapetalae View MSA
122793169 5272 Eudicot View MSA
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.1234 0.0 55.7433    
cufflinks 15.9482 0.0 45.1605    
cufflinks 15.1741 0.0 43.2892    
cufflinks 18.5428 0.0 51.9221    
cufflinks 19.1269 0.0 53.4061    
cufflinks 13.9771 0.0 40.1548    
cufflinks 25.9003 0.0 70.2666    
cufflinks 18.7515 0.0 52.2578    
cufflinks 36.6166 0.0 97.0198 High High
cufflinks 5.22366 0.0 16.7448   Low
cufflinks 24.0355 0.0 65.7847    

0 Strain