Gene : Phvul.008G266900 P. vulgaris v2.1
Defline:  (1 of 1) K13719 - ubiquitin thioesterase OTU1 (OTU1, YOD1) Genomic Order:  2682
Name:  ? Phvul.008G266900 Secondary Identifier:  ? PAC:37158019
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G266900 0.5kb upstream 0.5kb upstream 5900 true Chr08: 61222540-61228439 Phaseolus vulgaris
Phvul.008G266900 0.5kb upstream 0.5kb upstream 500 false Chr08: 61222540-61223039 Phaseolus vulgaris
Phvul.008G266900 0.5kb downstream 0.5kb downstream 5900 true Chr08: 61223040-61228939 Phaseolus vulgaris
Phvul.008G266900 0.5kb downstream 0.5kb downstream 500 false Chr08: 61228440-61228939 Phaseolus vulgaris
Phvul.008G266900 1.0kb upstream 1.0kb upstream 6400 true Chr08: 61222040-61228439 Phaseolus vulgaris
Phvul.008G266900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61222040-61223039 Phaseolus vulgaris
Phvul.008G266900 1.0kb downstream 1.0kb downstream 6400 true Chr08: 61223040-61229439 Phaseolus vulgaris
Phvul.008G266900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61228440-61229439 Phaseolus vulgaris
Phvul.008G266900 2.0kb upstream 2.0kb upstream 7400 true Chr08: 61221040-61228439 Phaseolus vulgaris
Phvul.008G266900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61221040-61223039 Phaseolus vulgaris
Phvul.008G266900 2.0kb downstream 2.0kb downstream 7400 true Chr08: 61223040-61230439 Phaseolus vulgaris
Phvul.008G266900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61228440-61230439 Phaseolus vulgaris
Phvul.008G266900 5.0kb upstream 5.0kb upstream 10400 true Chr08: 61218040-61228439 Phaseolus vulgaris
Phvul.008G266900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61218040-61223039 Phaseolus vulgaris
Phvul.008G266900 5.0kb downstream 5.0kb downstream 10400 true Chr08: 61223040-61233439 Phaseolus vulgaris
Phvul.008G266900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61228440-61233439 Phaseolus vulgaris
Phvul.008G266900 10.0kb upstream 10.0kb upstream 15400 true Chr08: 61213040-61228439 Phaseolus vulgaris
Phvul.008G266900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61213040-61223039 Phaseolus vulgaris
Phvul.008G266900 10.0kb downstream 10.0kb downstream 15400 true Chr08: 61223040-61238439 Phaseolus vulgaris
Phvul.008G266900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61228440-61238439 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300649 5265 Fabidae View MSA
124061628 5270 Rosid View MSA
123738549 5271 Pentapetalae View MSA
122788500 5272 Eudicot View MSA
122046032 5273 Angiosperm View MSA
121345268 5274 Embryophyte View MSA
123424822 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.6899 0.0 132.727 High High
cufflinks 18.0285 0.0 54.4057    
cufflinks 20.8445 0.0 62.7574    
cufflinks 49.0748 0.0 162.432 High High
cufflinks 13.3996 0.0 44.1461    
cufflinks 13.5847 0.0 43.446    
cufflinks 13.452 0.0 43.6437    
cufflinks 12.2628 0.0 40.6526   Low
cufflinks 27.3311 0.0 80.653    
cufflinks 19.211 0.0 58.4867    
cufflinks 16.0478 0.0 49.6658    

0 Strain