Gene : Phvul.008G264900 P. vulgaris v2.1
Defline:  (1 of 2) K11086 - small nuclear ribonucleoprotein B and B' (SNRPB, SMB) Genomic Order:  2662
Name:  ? Phvul.008G264900 Secondary Identifier:  ? PAC:37160957
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G264900 0.5kb upstream 0.5kb upstream 5257 true Chr08: 61077224-61082480 Phaseolus vulgaris
Phvul.008G264900 0.5kb upstream 0.5kb upstream 500 false Chr08: 61081981-61082480 Phaseolus vulgaris
Phvul.008G264900 0.5kb downstream 0.5kb downstream 5257 true Chr08: 61076724-61081980 Phaseolus vulgaris
Phvul.008G264900 0.5kb downstream 0.5kb downstream 500 false Chr08: 61076724-61077223 Phaseolus vulgaris
Phvul.008G264900 1.0kb upstream 1.0kb upstream 5757 true Chr08: 61077224-61082980 Phaseolus vulgaris
Phvul.008G264900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61081981-61082980 Phaseolus vulgaris
Phvul.008G264900 1.0kb downstream 1.0kb downstream 5757 true Chr08: 61076224-61081980 Phaseolus vulgaris
Phvul.008G264900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61076224-61077223 Phaseolus vulgaris
Phvul.008G264900 2.0kb upstream 2.0kb upstream 6757 true Chr08: 61077224-61083980 Phaseolus vulgaris
Phvul.008G264900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61081981-61083980 Phaseolus vulgaris
Phvul.008G264900 2.0kb downstream 2.0kb downstream 6757 true Chr08: 61075224-61081980 Phaseolus vulgaris
Phvul.008G264900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61075224-61077223 Phaseolus vulgaris
Phvul.008G264900 5.0kb upstream 5.0kb upstream 9757 true Chr08: 61077224-61086980 Phaseolus vulgaris
Phvul.008G264900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61081981-61086980 Phaseolus vulgaris
Phvul.008G264900 5.0kb downstream 5.0kb downstream 9757 true Chr08: 61072224-61081980 Phaseolus vulgaris
Phvul.008G264900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61072224-61077223 Phaseolus vulgaris
Phvul.008G264900 10.0kb upstream 10.0kb upstream 14757 true Chr08: 61077224-61091980 Phaseolus vulgaris
Phvul.008G264900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61081981-61091980 Phaseolus vulgaris
Phvul.008G264900 10.0kb downstream 10.0kb downstream 14757 true Chr08: 61067224-61081980 Phaseolus vulgaris
Phvul.008G264900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61067224-61077223 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307134 5265 Fabidae View MSA
124061345 5270 Rosid View MSA
123739342 5271 Pentapetalae View MSA
122791221 5272 Eudicot View MSA
122047301 5273 Angiosperm View MSA
121345396 5274 Embryophyte View MSA
123425185 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9517 0.0 61.9463   Low
cufflinks 67.3886 0.0 200.577 High High
cufflinks 20.0293 0.0 56.8263   Low
cufflinks 40.7263 0.0 115.227 High  
cufflinks 41.9075 0.0 119.83 High  
cufflinks 37.2421 0.0 103.648 High  
cufflinks 28.1689 0.0 78.6998 High  
cufflinks 31.4223 0.0 87.4204 High  
cufflinks 43.0799 0.0 121.623 High  
cufflinks 29.2105 0.0 81.4236    
cufflinks 41.1433 0.0 116.253 High  

0 Strain