Gene : Phvul.008G265300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR24073:SF515 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSD21 Genomic Order:  2666
Name:  ? Phvul.008G265300 Secondary Identifier:  ? PAC:37161052
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G265300 0.5kb upstream 0.5kb upstream 3204 true Chr08: 61103496-61106699 Phaseolus vulgaris
Phvul.008G265300 0.5kb upstream 0.5kb upstream 500 false Chr08: 61106200-61106699 Phaseolus vulgaris
Phvul.008G265300 0.5kb downstream 0.5kb downstream 3204 true Chr08: 61102996-61106199 Phaseolus vulgaris
Phvul.008G265300 0.5kb downstream 0.5kb downstream 500 false Chr08: 61102996-61103495 Phaseolus vulgaris
Phvul.008G265300 1.0kb upstream 1.0kb upstream 3704 true Chr08: 61103496-61107199 Phaseolus vulgaris
Phvul.008G265300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61106200-61107199 Phaseolus vulgaris
Phvul.008G265300 1.0kb downstream 1.0kb downstream 3704 true Chr08: 61102496-61106199 Phaseolus vulgaris
Phvul.008G265300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61102496-61103495 Phaseolus vulgaris
Phvul.008G265300 2.0kb upstream 2.0kb upstream 4704 true Chr08: 61103496-61108199 Phaseolus vulgaris
Phvul.008G265300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61106200-61108199 Phaseolus vulgaris
Phvul.008G265300 2.0kb downstream 2.0kb downstream 4704 true Chr08: 61101496-61106199 Phaseolus vulgaris
Phvul.008G265300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61101496-61103495 Phaseolus vulgaris
Phvul.008G265300 5.0kb upstream 5.0kb upstream 7704 true Chr08: 61103496-61111199 Phaseolus vulgaris
Phvul.008G265300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61106200-61111199 Phaseolus vulgaris
Phvul.008G265300 5.0kb downstream 5.0kb downstream 7704 true Chr08: 61098496-61106199 Phaseolus vulgaris
Phvul.008G265300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61098496-61103495 Phaseolus vulgaris
Phvul.008G265300 10.0kb upstream 10.0kb upstream 12704 true Chr08: 61103496-61116199 Phaseolus vulgaris
Phvul.008G265300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61106200-61116199 Phaseolus vulgaris
Phvul.008G265300 10.0kb downstream 10.0kb downstream 12704 true Chr08: 61093496-61106199 Phaseolus vulgaris
Phvul.008G265300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61093496-61103495 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029161 5273 Angiosperm View MSA
122304451 5265 Fabidae View MSA
124064316 5270 Rosid View MSA
123753329 5271 Pentapetalae View MSA
122789157 5272 Eudicot View MSA
121298542 5274 Embryophyte View MSA
123336508 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3818 0.0 38.5739   High
cufflinks 2.68753 0.0 12.6887    
cufflinks 1.4987 0.0 7.90723   Low
cufflinks 8.21045 0.0 32.0246    
cufflinks 8.64229 0.0 33.9548    
cufflinks 1.51253 0.0 6.23587   Low
cufflinks 9.06715 0.0 34.2509    
cufflinks 5.86227 0.0 24.3299    
cufflinks 8.54979 0.0 32.8298    
cufflinks 3.85496 0.0 15.7206    
cufflinks 6.89235 0.0 28.033    

0 Strain