Gene : Phvul.008G269300 P. vulgaris v2.1
Defline:  (1 of 1) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Genomic Order:  2706
Name:  ? Phvul.008G269300 Secondary Identifier:  ? PAC:37160923
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5084 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G269300 0.5kb upstream 0.5kb upstream 7004 true Chr08: 61396432-61403435 Phaseolus vulgaris
Phvul.008G269300 0.5kb upstream 0.5kb upstream 500 false Chr08: 61396432-61396931 Phaseolus vulgaris
Phvul.008G269300 0.5kb downstream 0.5kb downstream 7004 true Chr08: 61396932-61403935 Phaseolus vulgaris
Phvul.008G269300 0.5kb downstream 0.5kb downstream 500 false Chr08: 61403436-61403935 Phaseolus vulgaris
Phvul.008G269300 1.0kb upstream 1.0kb upstream 7504 true Chr08: 61395932-61403435 Phaseolus vulgaris
Phvul.008G269300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61395932-61396931 Phaseolus vulgaris
Phvul.008G269300 1.0kb downstream 1.0kb downstream 7504 true Chr08: 61396932-61404435 Phaseolus vulgaris
Phvul.008G269300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61403436-61404435 Phaseolus vulgaris
Phvul.008G269300 2.0kb upstream 2.0kb upstream 8504 true Chr08: 61394932-61403435 Phaseolus vulgaris
Phvul.008G269300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61394932-61396931 Phaseolus vulgaris
Phvul.008G269300 2.0kb downstream 2.0kb downstream 8504 true Chr08: 61396932-61405435 Phaseolus vulgaris
Phvul.008G269300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61403436-61405435 Phaseolus vulgaris
Phvul.008G269300 5.0kb upstream 5.0kb upstream 11504 true Chr08: 61391932-61403435 Phaseolus vulgaris
Phvul.008G269300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61391932-61396931 Phaseolus vulgaris
Phvul.008G269300 5.0kb downstream 5.0kb downstream 11504 true Chr08: 61396932-61408435 Phaseolus vulgaris
Phvul.008G269300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61403436-61408435 Phaseolus vulgaris
Phvul.008G269300 10.0kb upstream 10.0kb upstream 16504 true Chr08: 61386932-61403435 Phaseolus vulgaris
Phvul.008G269300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61386932-61396931 Phaseolus vulgaris
Phvul.008G269300 10.0kb downstream 10.0kb downstream 16504 true Chr08: 61396932-61413435 Phaseolus vulgaris
Phvul.008G269300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61403436-61413435 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303630 5265 Fabidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.7956 0.0 158.376 High  
cufflinks 56.583 0.0 151.47 High  
cufflinks 38.6574 0.0 101.105 High Low
cufflinks 99.4619 0.0 280.265 High High
cufflinks 49.4906 0.0 130.744 High  
cufflinks 32.1402 0.0 83.4228   Low
cufflinks 54.9613 0.0 146.909 High  
cufflinks 54.3823 0.0 145.601 High  
cufflinks 84.6138 0.0 234.394 High High
cufflinks 61.9032 0.0 167.017 High  
cufflinks 51.2188 0.0 135.743 High  

0 Strain