Gene : Phvul.008G270200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13673 - ESOPHAGEAL CANCER ASSOCIATED PROTEIN Genomic Order:  2715
Name:  ? Phvul.008G270200 Secondary Identifier:  ? PAC:37159148
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G270200 0.5kb upstream 0.5kb upstream 16150 true Chr08: 61448960-61465109 Phaseolus vulgaris
Phvul.008G270200 0.5kb upstream 0.5kb upstream 500 false Chr08: 61448960-61449459 Phaseolus vulgaris
Phvul.008G270200 0.5kb downstream 0.5kb downstream 16150 true Chr08: 61449460-61465609 Phaseolus vulgaris
Phvul.008G270200 0.5kb downstream 0.5kb downstream 500 false Chr08: 61465110-61465609 Phaseolus vulgaris
Phvul.008G270200 1.0kb upstream 1.0kb upstream 16650 true Chr08: 61448460-61465109 Phaseolus vulgaris
Phvul.008G270200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61448460-61449459 Phaseolus vulgaris
Phvul.008G270200 1.0kb downstream 1.0kb downstream 16650 true Chr08: 61449460-61466109 Phaseolus vulgaris
Phvul.008G270200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61465110-61466109 Phaseolus vulgaris
Phvul.008G270200 2.0kb upstream 2.0kb upstream 17650 true Chr08: 61447460-61465109 Phaseolus vulgaris
Phvul.008G270200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61447460-61449459 Phaseolus vulgaris
Phvul.008G270200 2.0kb downstream 2.0kb downstream 17650 true Chr08: 61449460-61467109 Phaseolus vulgaris
Phvul.008G270200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61465110-61467109 Phaseolus vulgaris
Phvul.008G270200 5.0kb upstream 5.0kb upstream 20650 true Chr08: 61444460-61465109 Phaseolus vulgaris
Phvul.008G270200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61444460-61449459 Phaseolus vulgaris
Phvul.008G270200 5.0kb downstream 5.0kb downstream 20650 true Chr08: 61449460-61470109 Phaseolus vulgaris
Phvul.008G270200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61465110-61470109 Phaseolus vulgaris
Phvul.008G270200 10.0kb upstream 10.0kb upstream 25650 true Chr08: 61439460-61465109 Phaseolus vulgaris
Phvul.008G270200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61439460-61449459 Phaseolus vulgaris
Phvul.008G270200 10.0kb downstream 10.0kb downstream 25650 true Chr08: 61449460-61475109 Phaseolus vulgaris
Phvul.008G270200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61465110-61475109 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791819 5273 Angiosperm View MSA
122300410 5265 Fabidae View MSA
124069469 5270 Rosid View MSA
123741968 5271 Pentapetalae View MSA
122794162 5272 Eudicot View MSA
121348229 5274 Embryophyte View MSA
123380782 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.874637 0.0 4.36497   Low
cufflinks 1.65778 0.0 7.04571    
cufflinks 2.55499 0.0 9.59029    
cufflinks 1.38137 0.0 6.20852   Low
cufflinks 2.87086 0.0 10.7337    
cufflinks 2.467 0.0 9.40077    
cufflinks 2.69805 0.0 10.1543    
cufflinks 3.18958 0.0 11.3731    
cufflinks 2.86117 0.0 10.6662    
cufflinks 3.22536 0.0 11.4992    
cufflinks 1.54575 0.0 6.76797    

0 Strain