Gene : Phvul.008G270300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13161:SF15 - SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOG Genomic Order:  2716
Name:  ? Phvul.008G270300 Secondary Identifier:  ? PAC:37160555
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G270300 0.5kb upstream 0.5kb upstream 5579 true Chr08: 61465981-61471559 Phaseolus vulgaris
Phvul.008G270300 0.5kb upstream 0.5kb upstream 500 false Chr08: 61465981-61466480 Phaseolus vulgaris
Phvul.008G270300 0.5kb downstream 0.5kb downstream 5579 true Chr08: 61466481-61472059 Phaseolus vulgaris
Phvul.008G270300 0.5kb downstream 0.5kb downstream 500 false Chr08: 61471560-61472059 Phaseolus vulgaris
Phvul.008G270300 1.0kb upstream 1.0kb upstream 6079 true Chr08: 61465481-61471559 Phaseolus vulgaris
Phvul.008G270300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 61465481-61466480 Phaseolus vulgaris
Phvul.008G270300 1.0kb downstream 1.0kb downstream 6079 true Chr08: 61466481-61472559 Phaseolus vulgaris
Phvul.008G270300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 61471560-61472559 Phaseolus vulgaris
Phvul.008G270300 2.0kb upstream 2.0kb upstream 7079 true Chr08: 61464481-61471559 Phaseolus vulgaris
Phvul.008G270300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 61464481-61466480 Phaseolus vulgaris
Phvul.008G270300 2.0kb downstream 2.0kb downstream 7079 true Chr08: 61466481-61473559 Phaseolus vulgaris
Phvul.008G270300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 61471560-61473559 Phaseolus vulgaris
Phvul.008G270300 5.0kb upstream 5.0kb upstream 10079 true Chr08: 61461481-61471559 Phaseolus vulgaris
Phvul.008G270300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 61461481-61466480 Phaseolus vulgaris
Phvul.008G270300 5.0kb downstream 5.0kb downstream 10079 true Chr08: 61466481-61476559 Phaseolus vulgaris
Phvul.008G270300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 61471560-61476559 Phaseolus vulgaris
Phvul.008G270300 10.0kb upstream 10.0kb upstream 15079 true Chr08: 61456481-61471559 Phaseolus vulgaris
Phvul.008G270300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 61456481-61466480 Phaseolus vulgaris
Phvul.008G270300 10.0kb downstream 10.0kb downstream 15079 true Chr08: 61466481-61481559 Phaseolus vulgaris
Phvul.008G270300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 61471560-61481559 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301281 5265 Fabidae View MSA
124061656 5270 Rosid View MSA
123739553 5271 Pentapetalae View MSA
122786719 5272 Eudicot View MSA
122047269 5273 Angiosperm View MSA
121346559 5274 Embryophyte View MSA
123424366 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.5429 0.0 25.183   Low
cufflinks 10.3698 0.0 37.6081    
cufflinks 24.6379 0.0 91.7207    
cufflinks 4.60294 0.0 15.0665   Low
cufflinks 15.2061 0.0 48.1292    
cufflinks 16.3463 0.0 59.1633    
cufflinks 24.0294 0.0 89.8503    
cufflinks 19.7699 0.0 63.4369    
cufflinks 21.7465 0.0 80.5927    
cufflinks 24.8085 0.0 92.3823    
cufflinks 10.531 0.0 33.6214    

0 Strain