Gene : Phvul.008G255400 P. vulgaris v2.1
Defline:  (1 of 1) K17301 - coatomer, subunit beta (COPB1, SEC26) Genomic Order:  2567
Name:  ? Phvul.008G255400 Secondary Identifier:  ? PAC:37161401
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G255400 0.5kb upstream 0.5kb upstream 5690 true Chr08: 60327503-60333192 Phaseolus vulgaris
Phvul.008G255400 0.5kb upstream 0.5kb upstream 500 false Chr08: 60327503-60328002 Phaseolus vulgaris
Phvul.008G255400 0.5kb downstream 0.5kb downstream 5690 true Chr08: 60328003-60333692 Phaseolus vulgaris
Phvul.008G255400 0.5kb downstream 0.5kb downstream 500 false Chr08: 60333193-60333692 Phaseolus vulgaris
Phvul.008G255400 1.0kb upstream 1.0kb upstream 6190 true Chr08: 60327003-60333192 Phaseolus vulgaris
Phvul.008G255400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60327003-60328002 Phaseolus vulgaris
Phvul.008G255400 1.0kb downstream 1.0kb downstream 6190 true Chr08: 60328003-60334192 Phaseolus vulgaris
Phvul.008G255400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60333193-60334192 Phaseolus vulgaris
Phvul.008G255400 2.0kb upstream 2.0kb upstream 7190 true Chr08: 60326003-60333192 Phaseolus vulgaris
Phvul.008G255400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60326003-60328002 Phaseolus vulgaris
Phvul.008G255400 2.0kb downstream 2.0kb downstream 7190 true Chr08: 60328003-60335192 Phaseolus vulgaris
Phvul.008G255400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60333193-60335192 Phaseolus vulgaris
Phvul.008G255400 5.0kb upstream 5.0kb upstream 10190 true Chr08: 60323003-60333192 Phaseolus vulgaris
Phvul.008G255400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60323003-60328002 Phaseolus vulgaris
Phvul.008G255400 5.0kb downstream 5.0kb downstream 10190 true Chr08: 60328003-60338192 Phaseolus vulgaris
Phvul.008G255400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60333193-60338192 Phaseolus vulgaris
Phvul.008G255400 10.0kb upstream 10.0kb upstream 15190 true Chr08: 60318003-60333192 Phaseolus vulgaris
Phvul.008G255400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60318003-60328002 Phaseolus vulgaris
Phvul.008G255400 10.0kb downstream 10.0kb downstream 15190 true Chr08: 60328003-60343192 Phaseolus vulgaris
Phvul.008G255400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60333193-60343192 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304906 5265 Fabidae View MSA
124065848 5270 Rosid View MSA
123753306 5271 Pentapetalae View MSA
122786430 5272 Eudicot View MSA
122042761 5273 Angiosperm View MSA
121349465 5274 Embryophyte View MSA
123426432 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.6847 0.0 65.4551   Low
cufflinks 65.5593 0.0 192.205 High  
cufflinks 54.7129 0.0 156.882 High  
cufflinks 59.5527 0.0 172.323 High  
cufflinks 79.2909 0.0 238.632 High  
cufflinks 65.9914 0.0 193.686 High  
cufflinks 62.448 0.0 182.816 High  
cufflinks 55.7951 0.0 160.492 High  
cufflinks 90.3472 0.0 278.531 High High
cufflinks 76.1414 0.0 227.584 High  
cufflinks 92.2357 0.0 284.24 High High

0 Strain