Gene : Phvul.008G256300 P. vulgaris v2.1
Defline:  (1 of 2) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  2577
Name:  ? Phvul.008G256300 Secondary Identifier:  ? PAC:37157984
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris SER-GLYSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris SERSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G256300 0.5kb upstream 0.5kb upstream 4324 true Chr08: 60375404-60379727 Phaseolus vulgaris
Phvul.008G256300 0.5kb upstream 0.5kb upstream 500 false Chr08: 60379228-60379727 Phaseolus vulgaris
Phvul.008G256300 0.5kb downstream 0.5kb downstream 4324 true Chr08: 60374904-60379227 Phaseolus vulgaris
Phvul.008G256300 0.5kb downstream 0.5kb downstream 500 false Chr08: 60374904-60375403 Phaseolus vulgaris
Phvul.008G256300 1.0kb upstream 1.0kb upstream 4824 true Chr08: 60375404-60380227 Phaseolus vulgaris
Phvul.008G256300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60379228-60380227 Phaseolus vulgaris
Phvul.008G256300 1.0kb downstream 1.0kb downstream 4824 true Chr08: 60374404-60379227 Phaseolus vulgaris
Phvul.008G256300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60374404-60375403 Phaseolus vulgaris
Phvul.008G256300 2.0kb upstream 2.0kb upstream 5824 true Chr08: 60375404-60381227 Phaseolus vulgaris
Phvul.008G256300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60379228-60381227 Phaseolus vulgaris
Phvul.008G256300 2.0kb downstream 2.0kb downstream 5824 true Chr08: 60373404-60379227 Phaseolus vulgaris
Phvul.008G256300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60373404-60375403 Phaseolus vulgaris
Phvul.008G256300 5.0kb upstream 5.0kb upstream 8824 true Chr08: 60375404-60384227 Phaseolus vulgaris
Phvul.008G256300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60379228-60384227 Phaseolus vulgaris
Phvul.008G256300 5.0kb downstream 5.0kb downstream 8824 true Chr08: 60370404-60379227 Phaseolus vulgaris
Phvul.008G256300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60370404-60375403 Phaseolus vulgaris
Phvul.008G256300 10.0kb upstream 10.0kb upstream 13824 true Chr08: 60375404-60389227 Phaseolus vulgaris
Phvul.008G256300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60379228-60389227 Phaseolus vulgaris
Phvul.008G256300 10.0kb downstream 10.0kb downstream 13824 true Chr08: 60365404-60379227 Phaseolus vulgaris
Phvul.008G256300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60365404-60375403 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306930 5265 Fabidae View MSA
124069252 5270 Rosid View MSA
123744106 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.1217 0.0 176.471 High Low
cufflinks 196.876 0.0 679.446 High High
cufflinks 78.9927 0.0 230.684 High Low
cufflinks 145.293 0.0 468.499 High  
cufflinks 175.564 0.0 589.209 High  
cufflinks 94.9442 0.0 285.991 High  
cufflinks 99.9297 0.0 305.928 High  
cufflinks 166.894 0.0 556.476 High  
cufflinks 139.401 0.0 452.423 High  
cufflinks 78.6791 0.0 230.088 High Low
cufflinks 186.954 0.0 639.752 High High

0 Strain