Gene : Phvul.008G258300 P. vulgaris v2.1
Defline:  (1 of 1) K14840 - nucleolar protein 53 (NOP53, GLTSCR2) Genomic Order:  2598
Name:  ? Phvul.008G258300 Secondary Identifier:  ? PAC:37158143
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G258300 0.5kb upstream 0.5kb upstream 4644 true Chr08: 60542133-60546776 Phaseolus vulgaris
Phvul.008G258300 0.5kb upstream 0.5kb upstream 500 false Chr08: 60546277-60546776 Phaseolus vulgaris
Phvul.008G258300 0.5kb downstream 0.5kb downstream 4644 true Chr08: 60541633-60546276 Phaseolus vulgaris
Phvul.008G258300 0.5kb downstream 0.5kb downstream 500 false Chr08: 60541633-60542132 Phaseolus vulgaris
Phvul.008G258300 1.0kb upstream 1.0kb upstream 5144 true Chr08: 60542133-60547276 Phaseolus vulgaris
Phvul.008G258300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60546277-60547276 Phaseolus vulgaris
Phvul.008G258300 1.0kb downstream 1.0kb downstream 5144 true Chr08: 60541133-60546276 Phaseolus vulgaris
Phvul.008G258300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60541133-60542132 Phaseolus vulgaris
Phvul.008G258300 2.0kb upstream 2.0kb upstream 6144 true Chr08: 60542133-60548276 Phaseolus vulgaris
Phvul.008G258300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60546277-60548276 Phaseolus vulgaris
Phvul.008G258300 2.0kb downstream 2.0kb downstream 6144 true Chr08: 60540133-60546276 Phaseolus vulgaris
Phvul.008G258300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60540133-60542132 Phaseolus vulgaris
Phvul.008G258300 5.0kb upstream 5.0kb upstream 9144 true Chr08: 60542133-60551276 Phaseolus vulgaris
Phvul.008G258300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60546277-60551276 Phaseolus vulgaris
Phvul.008G258300 5.0kb downstream 5.0kb downstream 9144 true Chr08: 60537133-60546276 Phaseolus vulgaris
Phvul.008G258300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60537133-60542132 Phaseolus vulgaris
Phvul.008G258300 10.0kb upstream 10.0kb upstream 14144 true Chr08: 60542133-60556276 Phaseolus vulgaris
Phvul.008G258300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60546277-60556276 Phaseolus vulgaris
Phvul.008G258300 10.0kb downstream 10.0kb downstream 14144 true Chr08: 60532133-60546276 Phaseolus vulgaris
Phvul.008G258300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60532133-60542132 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306821 5265 Fabidae View MSA
124069341 5270 Rosid View MSA
123739038 5271 Pentapetalae View MSA
122792577 5272 Eudicot View MSA
122046811 5273 Angiosperm View MSA
121347392 5274 Embryophyte View MSA
123425995 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.5344 0.0 45.7512    
cufflinks 24.8039 0.0 64.1493   High
cufflinks 12.7831 0.0 33.8987    
cufflinks 10.022 0.0 27.3566   Low
cufflinks 13.1471 0.0 35.1951    
cufflinks 13.4489 0.0 35.5699    
cufflinks 19.8209 0.0 51.4593    
cufflinks 21.6493 0.0 56.0446   High
cufflinks 17.4682 0.0 45.5646    
cufflinks 18.656 0.0 48.5832    
cufflinks 17.418 0.0 45.6003    

0 Strain