Gene : Phvul.008G260700 P. vulgaris v2.1
Defline:  (1 of 4) K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Genomic Order:  2622
Name:  ? Phvul.008G260700 Secondary Identifier:  ? PAC:37159560
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G260700 0.5kb upstream 0.5kb upstream 5592 true Chr08: 60757641-60763232 Phaseolus vulgaris
Phvul.008G260700 0.5kb upstream 0.5kb upstream 500 false Chr08: 60757641-60758140 Phaseolus vulgaris
Phvul.008G260700 0.5kb downstream 0.5kb downstream 5592 true Chr08: 60758141-60763732 Phaseolus vulgaris
Phvul.008G260700 0.5kb downstream 0.5kb downstream 500 false Chr08: 60763233-60763732 Phaseolus vulgaris
Phvul.008G260700 1.0kb upstream 1.0kb upstream 6092 true Chr08: 60757141-60763232 Phaseolus vulgaris
Phvul.008G260700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60757141-60758140 Phaseolus vulgaris
Phvul.008G260700 1.0kb downstream 1.0kb downstream 6092 true Chr08: 60758141-60764232 Phaseolus vulgaris
Phvul.008G260700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60763233-60764232 Phaseolus vulgaris
Phvul.008G260700 2.0kb upstream 2.0kb upstream 7092 true Chr08: 60756141-60763232 Phaseolus vulgaris
Phvul.008G260700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60756141-60758140 Phaseolus vulgaris
Phvul.008G260700 2.0kb downstream 2.0kb downstream 7092 true Chr08: 60758141-60765232 Phaseolus vulgaris
Phvul.008G260700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60763233-60765232 Phaseolus vulgaris
Phvul.008G260700 5.0kb upstream 5.0kb upstream 10092 true Chr08: 60753141-60763232 Phaseolus vulgaris
Phvul.008G260700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60753141-60758140 Phaseolus vulgaris
Phvul.008G260700 5.0kb downstream 5.0kb downstream 10092 true Chr08: 60758141-60768232 Phaseolus vulgaris
Phvul.008G260700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60763233-60768232 Phaseolus vulgaris
Phvul.008G260700 10.0kb upstream 10.0kb upstream 15092 true Chr08: 60748141-60763232 Phaseolus vulgaris
Phvul.008G260700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60748141-60758140 Phaseolus vulgaris
Phvul.008G260700 10.0kb downstream 10.0kb downstream 15092 true Chr08: 60758141-60773232 Phaseolus vulgaris
Phvul.008G260700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60763233-60773232 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313577 5265 Fabidae View MSA
124072004 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1569 0.0 44.1748    
cufflinks 40.7369 0.0 133.217 High  
cufflinks 42.011 0.0 118.008 High  
cufflinks 44.774 0.0 146.647 High  
cufflinks 19.2776 0.0 55.4404    
cufflinks 37.0135 0.0 120.865 High  
cufflinks 18.6497 0.0 53.4908    
cufflinks 35.2729 0.0 98.6276 High  
cufflinks 37.7349 0.0 105.435 High  
cufflinks 4.51746 0.0 17.8184   Low
cufflinks 15.8708 0.0 47.1409    

0 Strain