Gene : Phvul.008G260100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR24098:SF4 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-RELATED Genomic Order:  2616
Name:  ? Phvul.008G260100 Secondary Identifier:  ? PAC:37159656
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G260100 0.5kb upstream 0.5kb upstream 4755 true Chr08: 60722610-60727364 Phaseolus vulgaris
Phvul.008G260100 0.5kb upstream 0.5kb upstream 500 false Chr08: 60726865-60727364 Phaseolus vulgaris
Phvul.008G260100 0.5kb downstream 0.5kb downstream 4755 true Chr08: 60722110-60726864 Phaseolus vulgaris
Phvul.008G260100 0.5kb downstream 0.5kb downstream 500 false Chr08: 60722110-60722609 Phaseolus vulgaris
Phvul.008G260100 1.0kb upstream 1.0kb upstream 5255 true Chr08: 60722610-60727864 Phaseolus vulgaris
Phvul.008G260100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60726865-60727864 Phaseolus vulgaris
Phvul.008G260100 1.0kb downstream 1.0kb downstream 5255 true Chr08: 60721610-60726864 Phaseolus vulgaris
Phvul.008G260100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60721610-60722609 Phaseolus vulgaris
Phvul.008G260100 2.0kb upstream 2.0kb upstream 6255 true Chr08: 60722610-60728864 Phaseolus vulgaris
Phvul.008G260100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60726865-60728864 Phaseolus vulgaris
Phvul.008G260100 2.0kb downstream 2.0kb downstream 6255 true Chr08: 60720610-60726864 Phaseolus vulgaris
Phvul.008G260100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60720610-60722609 Phaseolus vulgaris
Phvul.008G260100 5.0kb upstream 5.0kb upstream 9255 true Chr08: 60722610-60731864 Phaseolus vulgaris
Phvul.008G260100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60726865-60731864 Phaseolus vulgaris
Phvul.008G260100 5.0kb downstream 5.0kb downstream 9255 true Chr08: 60717610-60726864 Phaseolus vulgaris
Phvul.008G260100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60717610-60722609 Phaseolus vulgaris
Phvul.008G260100 10.0kb upstream 10.0kb upstream 14255 true Chr08: 60722610-60736864 Phaseolus vulgaris
Phvul.008G260100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60726865-60736864 Phaseolus vulgaris
Phvul.008G260100 10.0kb downstream 10.0kb downstream 14255 true Chr08: 60712610-60726864 Phaseolus vulgaris
Phvul.008G260100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60712610-60722609 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314856 5265 Fabidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0399993 0.0 0.176811 Low  
cufflinks 0.111339 0.0 0.449406 Low  
cufflinks 0.0222876 0.0 0.104099 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0234272 0.0 0.110004 Low Low
cufflinks 0.0677022 0.0 0.284569 Low  
cufflinks 0.118433 0.0 0.475822 Low  
cufflinks 0.304473 0.0 1.13079 Low High
cufflinks 0.0484258 0.0 0.21031 Low  
cufflinks 0.0627676 0.0 0.266102 Low  
cufflinks 0.0691262 0.0 0.291502 Low  

0 Strain