Gene : Phvul.008G261100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10336:SF105 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 1-RELATED Genomic Order:  2626
Name:  ? Phvul.008G261100 Secondary Identifier:  ? PAC:37160995
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris LIPASYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-6351 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6367 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7039 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G261100 0.5kb upstream 0.5kb upstream 9157 true Chr08: 60815957-60825113 Phaseolus vulgaris
Phvul.008G261100 0.5kb upstream 0.5kb upstream 500 false Chr08: 60824614-60825113 Phaseolus vulgaris
Phvul.008G261100 0.5kb downstream 0.5kb downstream 9157 true Chr08: 60815457-60824613 Phaseolus vulgaris
Phvul.008G261100 0.5kb downstream 0.5kb downstream 500 false Chr08: 60815457-60815956 Phaseolus vulgaris
Phvul.008G261100 1.0kb upstream 1.0kb upstream 9657 true Chr08: 60815957-60825613 Phaseolus vulgaris
Phvul.008G261100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60824614-60825613 Phaseolus vulgaris
Phvul.008G261100 1.0kb downstream 1.0kb downstream 9657 true Chr08: 60814957-60824613 Phaseolus vulgaris
Phvul.008G261100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60814957-60815956 Phaseolus vulgaris
Phvul.008G261100 2.0kb upstream 2.0kb upstream 10657 true Chr08: 60815957-60826613 Phaseolus vulgaris
Phvul.008G261100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60824614-60826613 Phaseolus vulgaris
Phvul.008G261100 2.0kb downstream 2.0kb downstream 10657 true Chr08: 60813957-60824613 Phaseolus vulgaris
Phvul.008G261100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60813957-60815956 Phaseolus vulgaris
Phvul.008G261100 5.0kb upstream 5.0kb upstream 13657 true Chr08: 60815957-60829613 Phaseolus vulgaris
Phvul.008G261100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60824614-60829613 Phaseolus vulgaris
Phvul.008G261100 5.0kb downstream 5.0kb downstream 13657 true Chr08: 60810957-60824613 Phaseolus vulgaris
Phvul.008G261100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60810957-60815956 Phaseolus vulgaris
Phvul.008G261100 10.0kb upstream 10.0kb upstream 18657 true Chr08: 60815957-60834613 Phaseolus vulgaris
Phvul.008G261100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60824614-60834613 Phaseolus vulgaris
Phvul.008G261100 10.0kb downstream 10.0kb downstream 18657 true Chr08: 60805957-60824613 Phaseolus vulgaris
Phvul.008G261100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60805957-60815956 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792751 5273 Angiosperm View MSA
122313198 5265 Fabidae View MSA
124071681 5270 Rosid View MSA
123628037 5271 Pentapetalae View MSA
122798488 5272 Eudicot View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.157422 0.0 0.637859 Low  
cufflinks 0.501836 0.0 1.85602    
cufflinks 1.03402 0.0 3.55282    
cufflinks 1.02351 0.0 3.56412    
cufflinks 0.973224 0.0 3.4128    
cufflinks 0.607317 0.0 2.20651    
cufflinks 1.09169 0.0 3.74515    
cufflinks 0.251141 0.0 0.978391 Low  
cufflinks 1.89333 0.0 6.11632   High
cufflinks 0.0212047 0.0 0.104667 Low Low
cufflinks 1.18508 0.0 4.05785    

0 Strain