Gene : Phvul.008G261500 P. vulgaris v2.1
Defline:  (1 of 6) K07300 - Ca2+:H+ antiporter (chaA, CAX) Genomic Order:  2630
Name:  ? Phvul.008G261500 Secondary Identifier:  ? PAC:37159666
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G261500 0.5kb upstream 0.5kb upstream 4256 true Chr08: 60842961-60847216 Phaseolus vulgaris
Phvul.008G261500 0.5kb upstream 0.5kb upstream 500 false Chr08: 60842961-60843460 Phaseolus vulgaris
Phvul.008G261500 0.5kb downstream 0.5kb downstream 4256 true Chr08: 60843461-60847716 Phaseolus vulgaris
Phvul.008G261500 0.5kb downstream 0.5kb downstream 500 false Chr08: 60847217-60847716 Phaseolus vulgaris
Phvul.008G261500 1.0kb upstream 1.0kb upstream 4756 true Chr08: 60842461-60847216 Phaseolus vulgaris
Phvul.008G261500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60842461-60843460 Phaseolus vulgaris
Phvul.008G261500 1.0kb downstream 1.0kb downstream 4756 true Chr08: 60843461-60848216 Phaseolus vulgaris
Phvul.008G261500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60847217-60848216 Phaseolus vulgaris
Phvul.008G261500 2.0kb upstream 2.0kb upstream 5756 true Chr08: 60841461-60847216 Phaseolus vulgaris
Phvul.008G261500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60841461-60843460 Phaseolus vulgaris
Phvul.008G261500 2.0kb downstream 2.0kb downstream 5756 true Chr08: 60843461-60849216 Phaseolus vulgaris
Phvul.008G261500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60847217-60849216 Phaseolus vulgaris
Phvul.008G261500 5.0kb upstream 5.0kb upstream 8756 true Chr08: 60838461-60847216 Phaseolus vulgaris
Phvul.008G261500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60838461-60843460 Phaseolus vulgaris
Phvul.008G261500 5.0kb downstream 5.0kb downstream 8756 true Chr08: 60843461-60852216 Phaseolus vulgaris
Phvul.008G261500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60847217-60852216 Phaseolus vulgaris
Phvul.008G261500 10.0kb upstream 10.0kb upstream 13756 true Chr08: 60833461-60847216 Phaseolus vulgaris
Phvul.008G261500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60833461-60843460 Phaseolus vulgaris
Phvul.008G261500 10.0kb downstream 10.0kb downstream 13756 true Chr08: 60843461-60857216 Phaseolus vulgaris
Phvul.008G261500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60847217-60857216 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309507 5265 Fabidae View MSA
124071576 5270 Rosid View MSA
123745086 5271 Pentapetalae View MSA
122771361 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.392317 0.0 1.4918 Low Low
cufflinks 3.33027 0.0 10.1619    
cufflinks 0.902104 0.0 3.17199    
cufflinks 1.0358 0.0 3.6375    
cufflinks 2.15814 0.0 6.95877    
cufflinks 13.5011 0.0 35.9299    
cufflinks 17.0016 0.0 44.6279   High
cufflinks 18.751 0.0 48.8884   High
cufflinks 15.9492 0.0 42.0911   High
cufflinks 0.703392 0.0 2.5498   Low
cufflinks 7.61534 0.0 21.3771    

0 Strain