Gene : Phvul.008G261800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10291:SF6 - DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE 1-RELATED Genomic Order:  2633
Name:  ? Phvul.008G261800 Secondary Identifier:  ? PAC:37157762
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G261800 0.5kb upstream 0.5kb upstream 4743 true Chr08: 60873791-60878533 Phaseolus vulgaris
Phvul.008G261800 0.5kb upstream 0.5kb upstream 500 false Chr08: 60873791-60874290 Phaseolus vulgaris
Phvul.008G261800 0.5kb downstream 0.5kb downstream 4743 true Chr08: 60874291-60879033 Phaseolus vulgaris
Phvul.008G261800 0.5kb downstream 0.5kb downstream 500 false Chr08: 60878534-60879033 Phaseolus vulgaris
Phvul.008G261800 1.0kb upstream 1.0kb upstream 5243 true Chr08: 60873291-60878533 Phaseolus vulgaris
Phvul.008G261800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 60873291-60874290 Phaseolus vulgaris
Phvul.008G261800 1.0kb downstream 1.0kb downstream 5243 true Chr08: 60874291-60879533 Phaseolus vulgaris
Phvul.008G261800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 60878534-60879533 Phaseolus vulgaris
Phvul.008G261800 2.0kb upstream 2.0kb upstream 6243 true Chr08: 60872291-60878533 Phaseolus vulgaris
Phvul.008G261800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 60872291-60874290 Phaseolus vulgaris
Phvul.008G261800 2.0kb downstream 2.0kb downstream 6243 true Chr08: 60874291-60880533 Phaseolus vulgaris
Phvul.008G261800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 60878534-60880533 Phaseolus vulgaris
Phvul.008G261800 5.0kb upstream 5.0kb upstream 9243 true Chr08: 60869291-60878533 Phaseolus vulgaris
Phvul.008G261800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 60869291-60874290 Phaseolus vulgaris
Phvul.008G261800 5.0kb downstream 5.0kb downstream 9243 true Chr08: 60874291-60883533 Phaseolus vulgaris
Phvul.008G261800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 60878534-60883533 Phaseolus vulgaris
Phvul.008G261800 10.0kb upstream 10.0kb upstream 14243 true Chr08: 60864291-60878533 Phaseolus vulgaris
Phvul.008G261800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 60864291-60874290 Phaseolus vulgaris
Phvul.008G261800 10.0kb downstream 10.0kb downstream 14243 true Chr08: 60874291-60888533 Phaseolus vulgaris
Phvul.008G261800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 60878534-60888533 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310268 5265 Fabidae View MSA
124065300 5270 Rosid View MSA
123753715 5271 Pentapetalae View MSA
122795896 5272 Eudicot View MSA
122049873 5273 Angiosperm View MSA
121349663 5274 Embryophyte View MSA
123426106 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9135 0.0 37.3051    
cufflinks 0.776475 0.0 2.82942    
cufflinks 21.4405 0.0 56.136   High
cufflinks 12.1962 0.0 33.2569    
cufflinks 0.572008 0.0 2.14437 Low  
cufflinks 5.89939 0.0 17.2212    
cufflinks 0.0282002 0.0 0.138111 Low Low
cufflinks 0.0211633 0.0 0.107155 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.06417 0.0 9.61729    
cufflinks 2.5995 0.0 8.31391    

0 Strain