Gene : Phvul.008G243800 P. vulgaris v2.1
Defline:  (1 of 1) K05663 - mitochondrial ABC transporter ATM (ABC.ATM) Genomic Order:  2449
Name:  ? Phvul.008G243800 Secondary Identifier:  ? PAC:37159583
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G243800 0.5kb upstream 0.5kb upstream 23612 true Chr08: 59201461-59225072 Phaseolus vulgaris
Phvul.008G243800 0.5kb upstream 0.5kb upstream 500 false Chr08: 59201461-59201960 Phaseolus vulgaris
Phvul.008G243800 0.5kb downstream 0.5kb downstream 23612 true Chr08: 59201961-59225572 Phaseolus vulgaris
Phvul.008G243800 0.5kb downstream 0.5kb downstream 500 false Chr08: 59225073-59225572 Phaseolus vulgaris
Phvul.008G243800 1.0kb upstream 1.0kb upstream 24112 true Chr08: 59200961-59225072 Phaseolus vulgaris
Phvul.008G243800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 59200961-59201960 Phaseolus vulgaris
Phvul.008G243800 1.0kb downstream 1.0kb downstream 24112 true Chr08: 59201961-59226072 Phaseolus vulgaris
Phvul.008G243800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 59225073-59226072 Phaseolus vulgaris
Phvul.008G243800 2.0kb upstream 2.0kb upstream 25112 true Chr08: 59199961-59225072 Phaseolus vulgaris
Phvul.008G243800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 59199961-59201960 Phaseolus vulgaris
Phvul.008G243800 2.0kb downstream 2.0kb downstream 25112 true Chr08: 59201961-59227072 Phaseolus vulgaris
Phvul.008G243800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 59225073-59227072 Phaseolus vulgaris
Phvul.008G243800 5.0kb upstream 5.0kb upstream 28112 true Chr08: 59196961-59225072 Phaseolus vulgaris
Phvul.008G243800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 59196961-59201960 Phaseolus vulgaris
Phvul.008G243800 5.0kb downstream 5.0kb downstream 28112 true Chr08: 59201961-59230072 Phaseolus vulgaris
Phvul.008G243800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 59225073-59230072 Phaseolus vulgaris
Phvul.008G243800 10.0kb upstream 10.0kb upstream 33112 true Chr08: 59191961-59225072 Phaseolus vulgaris
Phvul.008G243800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 59191961-59201960 Phaseolus vulgaris
Phvul.008G243800 10.0kb downstream 10.0kb downstream 33112 true Chr08: 59201961-59235072 Phaseolus vulgaris
Phvul.008G243800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 59225073-59235072 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041097 5273 Angiosperm View MSA
122300552 5265 Fabidae View MSA
124060487 5270 Rosid View MSA
123750539 5271 Pentapetalae View MSA
122787289 5272 Eudicot View MSA
121345218 5274 Embryophyte View MSA
123424438 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.8991 0.0 15.9814   Low
cufflinks 8.99607 0.0 23.6796    
cufflinks 15.1196 0.0 39.0935   High
cufflinks 7.44264 0.0 19.9466    
cufflinks 7.03496 0.0 18.9288    
cufflinks 10.6682 0.0 27.8338    
cufflinks 8.5023 0.0 22.492    
cufflinks 10.1576 0.0 26.5258    
cufflinks 7.4239 0.0 19.8718    
cufflinks 7.82849 0.0 20.7884    
cufflinks 6.56815 0.0 17.7577    

0 Strain