Gene : Phvul.008G248100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR23092:SF30 - NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN-RELATED Genomic Order:  2492
Name:  ? Phvul.008G248100 Secondary Identifier:  ? PAC:37160078
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G248100 0.5kb upstream 0.5kb upstream 13658 true Chr08: 59708307-59721964 Phaseolus vulgaris
Phvul.008G248100 0.5kb upstream 0.5kb upstream 500 false Chr08: 59708307-59708806 Phaseolus vulgaris
Phvul.008G248100 0.5kb downstream 0.5kb downstream 13658 true Chr08: 59708807-59722464 Phaseolus vulgaris
Phvul.008G248100 0.5kb downstream 0.5kb downstream 500 false Chr08: 59721965-59722464 Phaseolus vulgaris
Phvul.008G248100 1.0kb upstream 1.0kb upstream 14158 true Chr08: 59707807-59721964 Phaseolus vulgaris
Phvul.008G248100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 59707807-59708806 Phaseolus vulgaris
Phvul.008G248100 1.0kb downstream 1.0kb downstream 14158 true Chr08: 59708807-59722964 Phaseolus vulgaris
Phvul.008G248100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 59721965-59722964 Phaseolus vulgaris
Phvul.008G248100 2.0kb upstream 2.0kb upstream 15158 true Chr08: 59706807-59721964 Phaseolus vulgaris
Phvul.008G248100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 59706807-59708806 Phaseolus vulgaris
Phvul.008G248100 2.0kb downstream 2.0kb downstream 15158 true Chr08: 59708807-59723964 Phaseolus vulgaris
Phvul.008G248100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 59721965-59723964 Phaseolus vulgaris
Phvul.008G248100 5.0kb upstream 5.0kb upstream 18158 true Chr08: 59703807-59721964 Phaseolus vulgaris
Phvul.008G248100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 59703807-59708806 Phaseolus vulgaris
Phvul.008G248100 5.0kb downstream 5.0kb downstream 18158 true Chr08: 59708807-59726964 Phaseolus vulgaris
Phvul.008G248100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 59721965-59726964 Phaseolus vulgaris
Phvul.008G248100 10.0kb upstream 10.0kb upstream 23158 true Chr08: 59698807-59721964 Phaseolus vulgaris
Phvul.008G248100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 59698807-59708806 Phaseolus vulgaris
Phvul.008G248100 10.0kb downstream 10.0kb downstream 23158 true Chr08: 59708807-59731964 Phaseolus vulgaris
Phvul.008G248100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 59721965-59731964 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309932 5265 Fabidae View MSA
124069788 5270 Rosid View MSA
123744457 5271 Pentapetalae View MSA
122791987 5272 Eudicot View MSA
122043315 5273 Angiosperm View MSA
121310107 5274 Embryophyte View MSA
123428025 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.60826 0.0 14.7194   Low
cufflinks 6.43612 0.0 31.7121    
cufflinks 7.02361 0.0 32.6572    
cufflinks 3.55465 0.0 13.6978   Low
cufflinks 6.40933 0.0 28.3546    
cufflinks 5.52426 0.0 27.0046    
cufflinks 6.64098 0.0 26.7717    
cufflinks 6.89508 0.0 28.7299    
cufflinks 6.50798 0.0 40.2301    
cufflinks 13.4798 0.0 72.6629   High
cufflinks 6.06611 0.0 31.0197    

0 Strain