Gene : Phvul.008G235700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31448:SF3 - IFA-BINDING PROTEIN Genomic Order:  2371
Name:  ? Phvul.008G235700 Secondary Identifier:  ? PAC:37157580
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G235700 0.5kb upstream 0.5kb upstream 5281 true Chr08: 58409147-58414427 Phaseolus vulgaris
Phvul.008G235700 0.5kb upstream 0.5kb upstream 500 false Chr08: 58413928-58414427 Phaseolus vulgaris
Phvul.008G235700 0.5kb downstream 0.5kb downstream 5281 true Chr08: 58408647-58413927 Phaseolus vulgaris
Phvul.008G235700 0.5kb downstream 0.5kb downstream 500 false Chr08: 58408647-58409146 Phaseolus vulgaris
Phvul.008G235700 1.0kb upstream 1.0kb upstream 5781 true Chr08: 58409147-58414927 Phaseolus vulgaris
Phvul.008G235700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 58413928-58414927 Phaseolus vulgaris
Phvul.008G235700 1.0kb downstream 1.0kb downstream 5781 true Chr08: 58408147-58413927 Phaseolus vulgaris
Phvul.008G235700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 58408147-58409146 Phaseolus vulgaris
Phvul.008G235700 2.0kb upstream 2.0kb upstream 6781 true Chr08: 58409147-58415927 Phaseolus vulgaris
Phvul.008G235700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 58413928-58415927 Phaseolus vulgaris
Phvul.008G235700 2.0kb downstream 2.0kb downstream 6781 true Chr08: 58407147-58413927 Phaseolus vulgaris
Phvul.008G235700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 58407147-58409146 Phaseolus vulgaris
Phvul.008G235700 5.0kb upstream 5.0kb upstream 9781 true Chr08: 58409147-58418927 Phaseolus vulgaris
Phvul.008G235700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 58413928-58418927 Phaseolus vulgaris
Phvul.008G235700 5.0kb downstream 5.0kb downstream 9781 true Chr08: 58404147-58413927 Phaseolus vulgaris
Phvul.008G235700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 58404147-58409146 Phaseolus vulgaris
Phvul.008G235700 10.0kb upstream 10.0kb upstream 14781 true Chr08: 58409147-58423927 Phaseolus vulgaris
Phvul.008G235700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 58413928-58423927 Phaseolus vulgaris
Phvul.008G235700 10.0kb downstream 10.0kb downstream 14781 true Chr08: 58399147-58413927 Phaseolus vulgaris
Phvul.008G235700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 58399147-58409146 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313978 5265 Fabidae View MSA
124070207 5270 Rosid View MSA
123753700 5271 Pentapetalae View MSA
122788125 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.495959 0.0 1.91101   Low
cufflinks 5.78397 0.0 19.251    
cufflinks 3.93574 0.0 13.8205    
cufflinks 1.22737 0.0 4.99862   Low
cufflinks 3.87103 0.0 12.2662    
cufflinks 11.0712 0.0 35.1889   High
cufflinks 5.19425 0.0 17.4485    
cufflinks 1.84534 0.0 6.50058    
cufflinks 6.85766 0.0 22.2461    
cufflinks 1.50558 0.0 5.72999    
cufflinks 4.45862 0.0 13.5274    

0 Strain