Gene : Phvul.008G236300 P. vulgaris v2.1
Defline:  (1 of 20) PF03080 - Domain of unknown function (DUF239) (DUF239) Genomic Order:  2376
Name:  ? Phvul.008G236300 Secondary Identifier:  ? PAC:37160456
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G236300 0.5kb upstream 0.5kb upstream 1911 true Chr08: 58457784-58459694 Phaseolus vulgaris
Phvul.008G236300 0.5kb upstream 0.5kb upstream 500 false Chr08: 58457784-58458283 Phaseolus vulgaris
Phvul.008G236300 0.5kb downstream 0.5kb downstream 1911 true Chr08: 58458284-58460194 Phaseolus vulgaris
Phvul.008G236300 0.5kb downstream 0.5kb downstream 500 false Chr08: 58459695-58460194 Phaseolus vulgaris
Phvul.008G236300 1.0kb upstream 1.0kb upstream 2411 true Chr08: 58457284-58459694 Phaseolus vulgaris
Phvul.008G236300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 58457284-58458283 Phaseolus vulgaris
Phvul.008G236300 1.0kb downstream 1.0kb downstream 2411 true Chr08: 58458284-58460694 Phaseolus vulgaris
Phvul.008G236300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 58459695-58460694 Phaseolus vulgaris
Phvul.008G236300 2.0kb upstream 2.0kb upstream 3411 true Chr08: 58456284-58459694 Phaseolus vulgaris
Phvul.008G236300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 58456284-58458283 Phaseolus vulgaris
Phvul.008G236300 2.0kb downstream 2.0kb downstream 3411 true Chr08: 58458284-58461694 Phaseolus vulgaris
Phvul.008G236300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 58459695-58461694 Phaseolus vulgaris
Phvul.008G236300 5.0kb upstream 5.0kb upstream 6411 true Chr08: 58453284-58459694 Phaseolus vulgaris
Phvul.008G236300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 58453284-58458283 Phaseolus vulgaris
Phvul.008G236300 5.0kb downstream 5.0kb downstream 6411 true Chr08: 58458284-58464694 Phaseolus vulgaris
Phvul.008G236300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 58459695-58464694 Phaseolus vulgaris
Phvul.008G236300 10.0kb upstream 10.0kb upstream 11411 true Chr08: 58448284-58459694 Phaseolus vulgaris
Phvul.008G236300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 58448284-58458283 Phaseolus vulgaris
Phvul.008G236300 10.0kb downstream 10.0kb downstream 11411 true Chr08: 58458284-58469694 Phaseolus vulgaris
Phvul.008G236300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 58459695-58469694 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312227 5265 Fabidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.38745 0.0 8.15189    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0458908 0.0 0.224751 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain