Gene : Phvul.008G238700 P. vulgaris v2.1
Genomic Order:  2399 Name:  ? Phvul.008G238700
Secondary Identifier:  ? PAC:37158628
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G238700 0.5kb upstream 0.5kb upstream 3264 true Chr08: 58738997-58742260 Phaseolus vulgaris
Phvul.008G238700 0.5kb upstream 0.5kb upstream 500 false Chr08: 58738997-58739496 Phaseolus vulgaris
Phvul.008G238700 0.5kb downstream 0.5kb downstream 3264 true Chr08: 58739497-58742760 Phaseolus vulgaris
Phvul.008G238700 0.5kb downstream 0.5kb downstream 500 false Chr08: 58742261-58742760 Phaseolus vulgaris
Phvul.008G238700 1.0kb upstream 1.0kb upstream 3764 true Chr08: 58738497-58742260 Phaseolus vulgaris
Phvul.008G238700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 58738497-58739496 Phaseolus vulgaris
Phvul.008G238700 1.0kb downstream 1.0kb downstream 3764 true Chr08: 58739497-58743260 Phaseolus vulgaris
Phvul.008G238700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 58742261-58743260 Phaseolus vulgaris
Phvul.008G238700 2.0kb upstream 2.0kb upstream 4764 true Chr08: 58737497-58742260 Phaseolus vulgaris
Phvul.008G238700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 58737497-58739496 Phaseolus vulgaris
Phvul.008G238700 2.0kb downstream 2.0kb downstream 4764 true Chr08: 58739497-58744260 Phaseolus vulgaris
Phvul.008G238700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 58742261-58744260 Phaseolus vulgaris
Phvul.008G238700 5.0kb upstream 5.0kb upstream 7764 true Chr08: 58734497-58742260 Phaseolus vulgaris
Phvul.008G238700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 58734497-58739496 Phaseolus vulgaris
Phvul.008G238700 5.0kb downstream 5.0kb downstream 7764 true Chr08: 58739497-58747260 Phaseolus vulgaris
Phvul.008G238700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 58742261-58747260 Phaseolus vulgaris
Phvul.008G238700 10.0kb upstream 10.0kb upstream 12764 true Chr08: 58729497-58742260 Phaseolus vulgaris
Phvul.008G238700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 58729497-58739496 Phaseolus vulgaris
Phvul.008G238700 10.0kb downstream 10.0kb downstream 12764 true Chr08: 58739497-58752260 Phaseolus vulgaris
Phvul.008G238700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 58742261-58752260 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312694 5265 Fabidae View MSA
124072732 5270 Rosid View MSA
123749551 5271 Pentapetalae View MSA
122797803 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.37038 0.0 22.7106    
cufflinks 2.74969 0.0 12.1512   Low
cufflinks 7.16283 0.0 25.0431    
cufflinks 0.8719 0.0 3.83205   Low
cufflinks 8.78521 0.0 29.9884    
cufflinks 13.0794 0.0 46.5141    
cufflinks 33.1777 0.0 94.0718 High High
cufflinks 16.3665 0.0 49.6481    
cufflinks 33.0599 0.0 97.2673 High High
cufflinks 3.94971 0.0 15.977    
cufflinks 11.7313 0.0 37.2017    

0 Strain