Gene : Phvul.008G243100 P. vulgaris v2.1
Defline:  (1 of 1) 3.6.1.23 - dUTP diphosphatase / dUTPase Genomic Order:  2442
Name:  ? Phvul.008G243100 Secondary Identifier:  ? PAC:37158841
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6545 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7184 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7206 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7211 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G243100 0.5kb upstream 0.5kb upstream 1666 true Chr08: 59152338-59154003 Phaseolus vulgaris
Phvul.008G243100 0.5kb upstream 0.5kb upstream 500 false Chr08: 59153504-59154003 Phaseolus vulgaris
Phvul.008G243100 0.5kb downstream 0.5kb downstream 1666 true Chr08: 59151838-59153503 Phaseolus vulgaris
Phvul.008G243100 0.5kb downstream 0.5kb downstream 500 false Chr08: 59151838-59152337 Phaseolus vulgaris
Phvul.008G243100 1.0kb upstream 1.0kb upstream 2166 true Chr08: 59152338-59154503 Phaseolus vulgaris
Phvul.008G243100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 59153504-59154503 Phaseolus vulgaris
Phvul.008G243100 1.0kb downstream 1.0kb downstream 2166 true Chr08: 59151338-59153503 Phaseolus vulgaris
Phvul.008G243100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 59151338-59152337 Phaseolus vulgaris
Phvul.008G243100 2.0kb upstream 2.0kb upstream 3166 true Chr08: 59152338-59155503 Phaseolus vulgaris
Phvul.008G243100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 59153504-59155503 Phaseolus vulgaris
Phvul.008G243100 2.0kb downstream 2.0kb downstream 3166 true Chr08: 59150338-59153503 Phaseolus vulgaris
Phvul.008G243100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 59150338-59152337 Phaseolus vulgaris
Phvul.008G243100 5.0kb upstream 5.0kb upstream 6166 true Chr08: 59152338-59158503 Phaseolus vulgaris
Phvul.008G243100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 59153504-59158503 Phaseolus vulgaris
Phvul.008G243100 5.0kb downstream 5.0kb downstream 6166 true Chr08: 59147338-59153503 Phaseolus vulgaris
Phvul.008G243100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 59147338-59152337 Phaseolus vulgaris
Phvul.008G243100 10.0kb upstream 10.0kb upstream 11166 true Chr08: 59152338-59163503 Phaseolus vulgaris
Phvul.008G243100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 59153504-59163503 Phaseolus vulgaris
Phvul.008G243100 10.0kb downstream 10.0kb downstream 11166 true Chr08: 59142338-59153503 Phaseolus vulgaris
Phvul.008G243100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 59142338-59152337 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040880 5273 Angiosperm View MSA
122313523 5265 Fabidae View MSA
124066453 5270 Rosid View MSA
123748196 5271 Pentapetalae View MSA
122788065 5272 Eudicot View MSA
121349726 5274 Embryophyte View MSA
123424494 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.4553 0.0 112.324 High  
cufflinks 62.0458 0.0 161.01 High  
cufflinks 8.67958 0.0 25.1838   Low
cufflinks 41.8095 0.0 108.091 High  
cufflinks 43.119 0.0 111.457 High  
cufflinks 27.408 0.0 71.8178    
cufflinks 22.7446 0.0 59.9623    
cufflinks 33.3666 0.0 86.6851 High  
cufflinks 22.4172 0.0 59.2184    
cufflinks 3.15094 0.0 10.1369   Low
cufflinks 54.6936 0.0 141.682 High  

0 Strain