Gene : Phvul.008G243200 P. vulgaris v2.1
Defline:  (1 of 1) 4.1.1.8 - Oxalyl-CoA decarboxylase / Oxalyl-CoA carboxy-lyase Genomic Order:  2443
Name:  ? Phvul.008G243200 Secondary Identifier:  ? PAC:37157647
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G243200 0.5kb upstream 0.5kb upstream 3422 true Chr08: 59154752-59158173 Phaseolus vulgaris
Phvul.008G243200 0.5kb upstream 0.5kb upstream 500 false Chr08: 59157674-59158173 Phaseolus vulgaris
Phvul.008G243200 0.5kb downstream 0.5kb downstream 3422 true Chr08: 59154252-59157673 Phaseolus vulgaris
Phvul.008G243200 0.5kb downstream 0.5kb downstream 500 false Chr08: 59154252-59154751 Phaseolus vulgaris
Phvul.008G243200 1.0kb upstream 1.0kb upstream 3922 true Chr08: 59154752-59158673 Phaseolus vulgaris
Phvul.008G243200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 59157674-59158673 Phaseolus vulgaris
Phvul.008G243200 1.0kb downstream 1.0kb downstream 3922 true Chr08: 59153752-59157673 Phaseolus vulgaris
Phvul.008G243200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 59153752-59154751 Phaseolus vulgaris
Phvul.008G243200 2.0kb upstream 2.0kb upstream 4922 true Chr08: 59154752-59159673 Phaseolus vulgaris
Phvul.008G243200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 59157674-59159673 Phaseolus vulgaris
Phvul.008G243200 2.0kb downstream 2.0kb downstream 4922 true Chr08: 59152752-59157673 Phaseolus vulgaris
Phvul.008G243200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 59152752-59154751 Phaseolus vulgaris
Phvul.008G243200 5.0kb upstream 5.0kb upstream 7922 true Chr08: 59154752-59162673 Phaseolus vulgaris
Phvul.008G243200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 59157674-59162673 Phaseolus vulgaris
Phvul.008G243200 5.0kb downstream 5.0kb downstream 7922 true Chr08: 59149752-59157673 Phaseolus vulgaris
Phvul.008G243200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 59149752-59154751 Phaseolus vulgaris
Phvul.008G243200 10.0kb upstream 10.0kb upstream 12922 true Chr08: 59154752-59167673 Phaseolus vulgaris
Phvul.008G243200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 59157674-59167673 Phaseolus vulgaris
Phvul.008G243200 10.0kb downstream 10.0kb downstream 12922 true Chr08: 59144752-59157673 Phaseolus vulgaris
Phvul.008G243200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 59144752-59154751 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301842 5265 Fabidae View MSA
124060453 5270 Rosid View MSA
123740686 5271 Pentapetalae View MSA
122785766 5272 Eudicot View MSA
122041866 5273 Angiosperm View MSA
121347920 5274 Embryophyte View MSA
123423961 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.4848 0.0 123.568 High  
cufflinks 26.5951 0.0 69.4725    
cufflinks 16.2035 0.0 41.8912   Low
cufflinks 51.0663 0.0 140.138 High High
cufflinks 36.3317 0.0 97.0755 High  
cufflinks 20.0662 0.0 51.9573   Low
cufflinks 32.9681 0.0 87.6815 High  
cufflinks 28.8244 0.0 75.6328 High  
cufflinks 38.0239 0.0 102.051 High  
cufflinks 49.9024 0.0 136.667 High High
cufflinks 38.7436 0.0 104.12 High  

0 Strain