Gene : Phvul.008G242800 P. vulgaris v2.1
Defline:  (1 of 1) K10867 - nijmegen breakage syndrome protein 1 (NBN, NBS1) Genomic Order:  2439
Name:  ? Phvul.008G242800 Secondary Identifier:  ? PAC:37157959
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G242800 0.5kb upstream 0.5kb upstream 8814 true Chr08: 59133209-59142022 Phaseolus vulgaris
Phvul.008G242800 0.5kb upstream 0.5kb upstream 500 false Chr08: 59133209-59133708 Phaseolus vulgaris
Phvul.008G242800 0.5kb downstream 0.5kb downstream 8814 true Chr08: 59133709-59142522 Phaseolus vulgaris
Phvul.008G242800 0.5kb downstream 0.5kb downstream 500 false Chr08: 59142023-59142522 Phaseolus vulgaris
Phvul.008G242800 1.0kb upstream 1.0kb upstream 9314 true Chr08: 59132709-59142022 Phaseolus vulgaris
Phvul.008G242800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 59132709-59133708 Phaseolus vulgaris
Phvul.008G242800 1.0kb downstream 1.0kb downstream 9314 true Chr08: 59133709-59143022 Phaseolus vulgaris
Phvul.008G242800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 59142023-59143022 Phaseolus vulgaris
Phvul.008G242800 2.0kb upstream 2.0kb upstream 10314 true Chr08: 59131709-59142022 Phaseolus vulgaris
Phvul.008G242800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 59131709-59133708 Phaseolus vulgaris
Phvul.008G242800 2.0kb downstream 2.0kb downstream 10314 true Chr08: 59133709-59144022 Phaseolus vulgaris
Phvul.008G242800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 59142023-59144022 Phaseolus vulgaris
Phvul.008G242800 5.0kb upstream 5.0kb upstream 13314 true Chr08: 59128709-59142022 Phaseolus vulgaris
Phvul.008G242800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 59128709-59133708 Phaseolus vulgaris
Phvul.008G242800 5.0kb downstream 5.0kb downstream 13314 true Chr08: 59133709-59147022 Phaseolus vulgaris
Phvul.008G242800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 59142023-59147022 Phaseolus vulgaris
Phvul.008G242800 10.0kb upstream 10.0kb upstream 18314 true Chr08: 59123709-59142022 Phaseolus vulgaris
Phvul.008G242800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 59123709-59133708 Phaseolus vulgaris
Phvul.008G242800 10.0kb downstream 10.0kb downstream 18314 true Chr08: 59133709-59152022 Phaseolus vulgaris
Phvul.008G242800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 59142023-59152022 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301904 5265 Fabidae View MSA
124064299 5270 Rosid View MSA
123737066 5271 Pentapetalae View MSA
122786000 5272 Eudicot View MSA
122047101 5273 Angiosperm View MSA
121349305 5274 Embryophyte View MSA
123381266 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.11239 0.0 11.8579    
cufflinks 4.08201 0.0 11.7942    
cufflinks 4.97979 0.0 14.0456   High
cufflinks 2.7941 0.0 8.52126   Low
cufflinks 3.51205 0.0 10.4211    
cufflinks 4.17268 0.0 12.0064    
cufflinks 4.29903 0.0 12.3638    
cufflinks 4.43907 0.0 12.6339    
cufflinks 4.13006 0.0 11.9573    
cufflinks 3.68715 0.0 10.7851    
cufflinks 2.84074 0.0 8.61963   Low

0 Strain