Gene : Phvul.008G224400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR34953:SF1 - ALPHA/BETA HYDROLASE RELATED PROTEIN Genomic Order:  2283
Name:  ? Phvul.008G224400 Secondary Identifier:  ? PAC:37158980
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G224400 0.5kb upstream 0.5kb upstream 1499 true Chr08: 57431473-57432971 Phaseolus vulgaris
Phvul.008G224400 0.5kb upstream 0.5kb upstream 500 false Chr08: 57431473-57431972 Phaseolus vulgaris
Phvul.008G224400 0.5kb downstream 0.5kb downstream 1499 true Chr08: 57431973-57433471 Phaseolus vulgaris
Phvul.008G224400 0.5kb downstream 0.5kb downstream 500 false Chr08: 57432972-57433471 Phaseolus vulgaris
Phvul.008G224400 1.0kb upstream 1.0kb upstream 1999 true Chr08: 57430973-57432971 Phaseolus vulgaris
Phvul.008G224400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 57430973-57431972 Phaseolus vulgaris
Phvul.008G224400 1.0kb downstream 1.0kb downstream 1999 true Chr08: 57431973-57433971 Phaseolus vulgaris
Phvul.008G224400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 57432972-57433971 Phaseolus vulgaris
Phvul.008G224400 2.0kb upstream 2.0kb upstream 2999 true Chr08: 57429973-57432971 Phaseolus vulgaris
Phvul.008G224400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 57429973-57431972 Phaseolus vulgaris
Phvul.008G224400 2.0kb downstream 2.0kb downstream 2999 true Chr08: 57431973-57434971 Phaseolus vulgaris
Phvul.008G224400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 57432972-57434971 Phaseolus vulgaris
Phvul.008G224400 5.0kb upstream 5.0kb upstream 5999 true Chr08: 57426973-57432971 Phaseolus vulgaris
Phvul.008G224400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 57426973-57431972 Phaseolus vulgaris
Phvul.008G224400 5.0kb downstream 5.0kb downstream 5999 true Chr08: 57431973-57437971 Phaseolus vulgaris
Phvul.008G224400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 57432972-57437971 Phaseolus vulgaris
Phvul.008G224400 10.0kb upstream 10.0kb upstream 10999 true Chr08: 57421973-57432971 Phaseolus vulgaris
Phvul.008G224400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 57421973-57431972 Phaseolus vulgaris
Phvul.008G224400 10.0kb downstream 10.0kb downstream 10999 true Chr08: 57431973-57442971 Phaseolus vulgaris
Phvul.008G224400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 57432972-57442971 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253551 5265 Fabidae View MSA
123996102 5270 Rosid View MSA
123570636 5271 Pentapetalae View MSA
122605372 5272 Eudicot View MSA
122043684 5273 Angiosperm View MSA
121346318 5274 Embryophyte View MSA
123380366 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.368383 0.0 1.5522 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.144017 0.0 0.668978 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.363405 0.0 1.54718 Low  
cufflinks 0.712564 0.0 2.85809    
cufflinks 0.302523 0.0 1.31384 Low  
cufflinks 1.24481 0.0 4.78856   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain