Gene : Phvul.008G228200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32175:SF2 - SURFEIT LOCUS PROTEIN 2 Genomic Order:  2321
Name:  ? Phvul.008G228200 Secondary Identifier:  ? PAC:37159621
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G228200 0.5kb upstream 0.5kb upstream 6442 true Chr08: 57817276-57823717 Phaseolus vulgaris
Phvul.008G228200 0.5kb upstream 0.5kb upstream 500 false Chr08: 57817276-57817775 Phaseolus vulgaris
Phvul.008G228200 0.5kb downstream 0.5kb downstream 6442 true Chr08: 57817776-57824217 Phaseolus vulgaris
Phvul.008G228200 0.5kb downstream 0.5kb downstream 500 false Chr08: 57823718-57824217 Phaseolus vulgaris
Phvul.008G228200 1.0kb upstream 1.0kb upstream 6942 true Chr08: 57816776-57823717 Phaseolus vulgaris
Phvul.008G228200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 57816776-57817775 Phaseolus vulgaris
Phvul.008G228200 1.0kb downstream 1.0kb downstream 6942 true Chr08: 57817776-57824717 Phaseolus vulgaris
Phvul.008G228200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 57823718-57824717 Phaseolus vulgaris
Phvul.008G228200 2.0kb upstream 2.0kb upstream 7942 true Chr08: 57815776-57823717 Phaseolus vulgaris
Phvul.008G228200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 57815776-57817775 Phaseolus vulgaris
Phvul.008G228200 2.0kb downstream 2.0kb downstream 7942 true Chr08: 57817776-57825717 Phaseolus vulgaris
Phvul.008G228200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 57823718-57825717 Phaseolus vulgaris
Phvul.008G228200 5.0kb upstream 5.0kb upstream 10942 true Chr08: 57812776-57823717 Phaseolus vulgaris
Phvul.008G228200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 57812776-57817775 Phaseolus vulgaris
Phvul.008G228200 5.0kb downstream 5.0kb downstream 10942 true Chr08: 57817776-57828717 Phaseolus vulgaris
Phvul.008G228200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 57823718-57828717 Phaseolus vulgaris
Phvul.008G228200 10.0kb upstream 10.0kb upstream 15942 true Chr08: 57807776-57823717 Phaseolus vulgaris
Phvul.008G228200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 57807776-57817775 Phaseolus vulgaris
Phvul.008G228200 10.0kb downstream 10.0kb downstream 15942 true Chr08: 57817776-57833717 Phaseolus vulgaris
Phvul.008G228200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 57823718-57833717 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308653 5265 Fabidae View MSA
124062498 5270 Rosid View MSA
123741636 5271 Pentapetalae View MSA
122789257 5272 Eudicot View MSA
122045153 5273 Angiosperm View MSA
121344193 5274 Embryophyte View MSA
123425861 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.87379 0.0 24.5083    
cufflinks 9.93359 0.0 27.2214    
cufflinks 15.156 0.0 40.0738   High
cufflinks 7.24066 0.0 20.6388   Low
cufflinks 10.1355 0.0 27.9694    
cufflinks 11.2571 0.0 30.4634    
cufflinks 8.97803 0.0 24.6916    
cufflinks 10.9055 0.0 29.4556    
cufflinks 8.13667 0.0 22.6016    
cufflinks 7.93711 0.0 22.2595   Low
cufflinks 12.8655 0.0 34.588   High

0 Strain