Gene : Phvul.008G227300 P. vulgaris v2.1
Defline:  (1 of 2) K02917 - large subunit ribosomal protein L35Ae (RP-L35Ae, RPL35A) Genomic Order:  2312
Name:  ? Phvul.008G227300 Secondary Identifier:  ? PAC:37159039
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G227300 0.5kb upstream 0.5kb upstream 4761 true Chr08: 57734791-57739551 Phaseolus vulgaris
Phvul.008G227300 0.5kb upstream 0.5kb upstream 500 false Chr08: 57739052-57739551 Phaseolus vulgaris
Phvul.008G227300 0.5kb downstream 0.5kb downstream 4761 true Chr08: 57734291-57739051 Phaseolus vulgaris
Phvul.008G227300 0.5kb downstream 0.5kb downstream 500 false Chr08: 57734291-57734790 Phaseolus vulgaris
Phvul.008G227300 1.0kb upstream 1.0kb upstream 5261 true Chr08: 57734791-57740051 Phaseolus vulgaris
Phvul.008G227300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 57739052-57740051 Phaseolus vulgaris
Phvul.008G227300 1.0kb downstream 1.0kb downstream 5261 true Chr08: 57733791-57739051 Phaseolus vulgaris
Phvul.008G227300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 57733791-57734790 Phaseolus vulgaris
Phvul.008G227300 2.0kb upstream 2.0kb upstream 6261 true Chr08: 57734791-57741051 Phaseolus vulgaris
Phvul.008G227300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 57739052-57741051 Phaseolus vulgaris
Phvul.008G227300 2.0kb downstream 2.0kb downstream 6261 true Chr08: 57732791-57739051 Phaseolus vulgaris
Phvul.008G227300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 57732791-57734790 Phaseolus vulgaris
Phvul.008G227300 5.0kb upstream 5.0kb upstream 9261 true Chr08: 57734791-57744051 Phaseolus vulgaris
Phvul.008G227300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 57739052-57744051 Phaseolus vulgaris
Phvul.008G227300 5.0kb downstream 5.0kb downstream 9261 true Chr08: 57729791-57739051 Phaseolus vulgaris
Phvul.008G227300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 57729791-57734790 Phaseolus vulgaris
Phvul.008G227300 10.0kb upstream 10.0kb upstream 14261 true Chr08: 57734791-57749051 Phaseolus vulgaris
Phvul.008G227300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 57739052-57749051 Phaseolus vulgaris
Phvul.008G227300 10.0kb downstream 10.0kb downstream 14261 true Chr08: 57724791-57739051 Phaseolus vulgaris
Phvul.008G227300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 57724791-57734790 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310712 5265 Fabidae View MSA
124063370 5270 Rosid View MSA
123751278 5271 Pentapetalae View MSA
122792399 5272 Eudicot View MSA
122043317 5273 Angiosperm View MSA
121349974 5274 Embryophyte View MSA
123428152 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 107.544 0.0 280.713 High  
cufflinks 131.515 0.0 347.47 High High
cufflinks 63.9033 0.0 165.187 High Low
cufflinks 161.278 0.0 430.838 High High
cufflinks 107.633 0.0 280.699 High  
cufflinks 48.2873 0.0 125.343 High Low
cufflinks 77.136 0.0 199.784 High  
cufflinks 96.6289 0.0 251.96 High  
cufflinks 104.646 0.0 273.887 High  
cufflinks 74.9754 0.0 193.857 High  
cufflinks 106.827 0.0 279.14 High  

0 Strain