Gene : Phvul.008G225400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR19957:SF117 - SYNTAXIN-31 Genomic Order:  2293
Name:  ? Phvul.008G225400 Secondary Identifier:  ? PAC:37159203
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G225400 0.5kb upstream 0.5kb upstream 6147 true Chr08: 57532085-57538231 Phaseolus vulgaris
Phvul.008G225400 0.5kb upstream 0.5kb upstream 500 false Chr08: 57537732-57538231 Phaseolus vulgaris
Phvul.008G225400 0.5kb downstream 0.5kb downstream 6147 true Chr08: 57531585-57537731 Phaseolus vulgaris
Phvul.008G225400 0.5kb downstream 0.5kb downstream 500 false Chr08: 57531585-57532084 Phaseolus vulgaris
Phvul.008G225400 1.0kb upstream 1.0kb upstream 6647 true Chr08: 57532085-57538731 Phaseolus vulgaris
Phvul.008G225400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 57537732-57538731 Phaseolus vulgaris
Phvul.008G225400 1.0kb downstream 1.0kb downstream 6647 true Chr08: 57531085-57537731 Phaseolus vulgaris
Phvul.008G225400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 57531085-57532084 Phaseolus vulgaris
Phvul.008G225400 2.0kb upstream 2.0kb upstream 7647 true Chr08: 57532085-57539731 Phaseolus vulgaris
Phvul.008G225400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 57537732-57539731 Phaseolus vulgaris
Phvul.008G225400 2.0kb downstream 2.0kb downstream 7647 true Chr08: 57530085-57537731 Phaseolus vulgaris
Phvul.008G225400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 57530085-57532084 Phaseolus vulgaris
Phvul.008G225400 5.0kb upstream 5.0kb upstream 10647 true Chr08: 57532085-57542731 Phaseolus vulgaris
Phvul.008G225400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 57537732-57542731 Phaseolus vulgaris
Phvul.008G225400 5.0kb downstream 5.0kb downstream 10647 true Chr08: 57527085-57537731 Phaseolus vulgaris
Phvul.008G225400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 57527085-57532084 Phaseolus vulgaris
Phvul.008G225400 10.0kb upstream 10.0kb upstream 15647 true Chr08: 57532085-57547731 Phaseolus vulgaris
Phvul.008G225400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 57537732-57547731 Phaseolus vulgaris
Phvul.008G225400 10.0kb downstream 10.0kb downstream 15647 true Chr08: 57522085-57537731 Phaseolus vulgaris
Phvul.008G225400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 57522085-57532084 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299505 5265 Fabidae View MSA
124069079 5270 Rosid View MSA
123747067 5271 Pentapetalae View MSA
122787629 5272 Eudicot View MSA
122042562 5273 Angiosperm View MSA
121309986 5274 Embryophyte View MSA
123347598 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9188 0.0 29.517    
cufflinks 6.30731 0.0 17.8984   Low
cufflinks 9.33461 0.0 25.6344    
cufflinks 13.848 0.0 36.7907   High
cufflinks 12.9265 0.0 34.6045    
cufflinks 6.96571 0.0 19.5916    
cufflinks 8.68837 0.0 23.912    
cufflinks 5.25177 0.0 15.1847   Low
cufflinks 8.40083 0.0 23.1685    
cufflinks 11.1042 0.0 29.9948    
cufflinks 16.7981 0.0 44.1089   High

0 Strain