Gene : Phvul.008G225500 P. vulgaris v2.1
Defline:  (1 of 2) PF07014 - Hs1pro-1 protein C-terminus (Hs1pro-1_C) Genomic Order:  2294
Name:  ? Phvul.008G225500 Secondary Identifier:  ? PAC:37161413
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G225500 0.5kb upstream 0.5kb upstream 2715 true Chr08: 57546121-57548835 Phaseolus vulgaris
Phvul.008G225500 0.5kb upstream 0.5kb upstream 500 false Chr08: 57546121-57546620 Phaseolus vulgaris
Phvul.008G225500 0.5kb downstream 0.5kb downstream 2715 true Chr08: 57546621-57549335 Phaseolus vulgaris
Phvul.008G225500 0.5kb downstream 0.5kb downstream 500 false Chr08: 57548836-57549335 Phaseolus vulgaris
Phvul.008G225500 1.0kb upstream 1.0kb upstream 3215 true Chr08: 57545621-57548835 Phaseolus vulgaris
Phvul.008G225500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 57545621-57546620 Phaseolus vulgaris
Phvul.008G225500 1.0kb downstream 1.0kb downstream 3215 true Chr08: 57546621-57549835 Phaseolus vulgaris
Phvul.008G225500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 57548836-57549835 Phaseolus vulgaris
Phvul.008G225500 2.0kb upstream 2.0kb upstream 4215 true Chr08: 57544621-57548835 Phaseolus vulgaris
Phvul.008G225500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 57544621-57546620 Phaseolus vulgaris
Phvul.008G225500 2.0kb downstream 2.0kb downstream 4215 true Chr08: 57546621-57550835 Phaseolus vulgaris
Phvul.008G225500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 57548836-57550835 Phaseolus vulgaris
Phvul.008G225500 5.0kb upstream 5.0kb upstream 7215 true Chr08: 57541621-57548835 Phaseolus vulgaris
Phvul.008G225500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 57541621-57546620 Phaseolus vulgaris
Phvul.008G225500 5.0kb downstream 5.0kb downstream 7215 true Chr08: 57546621-57553835 Phaseolus vulgaris
Phvul.008G225500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 57548836-57553835 Phaseolus vulgaris
Phvul.008G225500 10.0kb upstream 10.0kb upstream 12215 true Chr08: 57536621-57548835 Phaseolus vulgaris
Phvul.008G225500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 57536621-57546620 Phaseolus vulgaris
Phvul.008G225500 10.0kb downstream 10.0kb downstream 12215 true Chr08: 57546621-57558835 Phaseolus vulgaris
Phvul.008G225500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 57548836-57558835 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658335 5273 Angiosperm View MSA
122296548 5265 Fabidae View MSA
124041943 5270 Rosid View MSA
123612505 5271 Pentapetalae View MSA
122647004 5272 Eudicot View MSA
120930325 5274 Embryophyte View MSA
122970837 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.3379 0.0 249.947 High High
cufflinks 9.08771 0.0 23.826    
cufflinks 2.65779 0.0 7.80397   Low
cufflinks 11.5118 0.0 29.8954    
cufflinks 17.2561 0.0 44.628    
cufflinks 1.86679 0.0 5.6585   Low
cufflinks 49.2388 0.0 136.239 High  
cufflinks 23.5032 0.0 61.18    
cufflinks 7.72519 0.0 20.3517    
cufflinks 118.586 0.0 363.803 High High
cufflinks 9.01925 0.0 23.5885    

0 Strain