Gene : Phvul.008G230300 P. vulgaris v2.1
Defline:  (1 of 2) 1.2.1.41//2.7.2.11//PROLINE-MULTI - Glutamate-5-semialdehyde dehydrogenase / Glutamyl-gamma-semialdehyde dehydrogenase // Glutamate 5-kinase / Gamma-glutamyl kinase Genomic Order:  2342
Name:  ? Phvul.008G230300 Secondary Identifier:  ? PAC:37158782
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ARGININE-SYN4-PWY Phaseolus vulgaris pathologic  
Pvulgaris CITRULBIO-PWY Phaseolus vulgaris pathologic  
Pvulgaris PROSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3341 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6922 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G230300 0.5kb upstream 0.5kb upstream 8427 true Chr08: 58167969-58176395 Phaseolus vulgaris
Phvul.008G230300 0.5kb upstream 0.5kb upstream 500 false Chr08: 58167969-58168468 Phaseolus vulgaris
Phvul.008G230300 0.5kb downstream 0.5kb downstream 8427 true Chr08: 58168469-58176895 Phaseolus vulgaris
Phvul.008G230300 0.5kb downstream 0.5kb downstream 500 false Chr08: 58176396-58176895 Phaseolus vulgaris
Phvul.008G230300 1.0kb upstream 1.0kb upstream 8927 true Chr08: 58167469-58176395 Phaseolus vulgaris
Phvul.008G230300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 58167469-58168468 Phaseolus vulgaris
Phvul.008G230300 1.0kb downstream 1.0kb downstream 8927 true Chr08: 58168469-58177395 Phaseolus vulgaris
Phvul.008G230300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 58176396-58177395 Phaseolus vulgaris
Phvul.008G230300 2.0kb upstream 2.0kb upstream 9927 true Chr08: 58166469-58176395 Phaseolus vulgaris
Phvul.008G230300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 58166469-58168468 Phaseolus vulgaris
Phvul.008G230300 2.0kb downstream 2.0kb downstream 9927 true Chr08: 58168469-58178395 Phaseolus vulgaris
Phvul.008G230300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 58176396-58178395 Phaseolus vulgaris
Phvul.008G230300 5.0kb upstream 5.0kb upstream 12927 true Chr08: 58163469-58176395 Phaseolus vulgaris
Phvul.008G230300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 58163469-58168468 Phaseolus vulgaris
Phvul.008G230300 5.0kb downstream 5.0kb downstream 12927 true Chr08: 58168469-58181395 Phaseolus vulgaris
Phvul.008G230300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 58176396-58181395 Phaseolus vulgaris
Phvul.008G230300 10.0kb upstream 10.0kb upstream 17927 true Chr08: 58158469-58176395 Phaseolus vulgaris
Phvul.008G230300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 58158469-58168468 Phaseolus vulgaris
Phvul.008G230300 10.0kb downstream 10.0kb downstream 17927 true Chr08: 58168469-58186395 Phaseolus vulgaris
Phvul.008G230300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 58176396-58186395 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311815 5265 Fabidae View MSA
124064973 5270 Rosid View MSA
123744591 5271 Pentapetalae View MSA
122786608 5272 Eudicot View MSA
122047433 5273 Angiosperm View MSA
121343806 5274 Embryophyte View MSA
123427959 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.83913 0.0 13.3801   Low
cufflinks 10.4094 0.0 27.207    
cufflinks 11.1035 0.0 28.9375    
cufflinks 7.44902 0.0 19.9838    
cufflinks 8.71588 0.0 23.108    
cufflinks 11.1361 0.0 29.01    
cufflinks 13.3184 0.0 34.5175    
cufflinks 15.5496 0.0 40.1984   High
cufflinks 13.0199 0.0 33.7773    
cufflinks 12.5878 0.0 32.6804    
cufflinks 9.46678 0.0 24.9322    

0 Strain