Gene : Phvul.008G214600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Genomic Order:  2185
Name:  ? Phvul.008G214600 Secondary Identifier:  ? PAC:37158958
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G214600 0.5kb upstream 0.5kb upstream 4937 true Chr08: 56356499-56361435 Phaseolus vulgaris
Phvul.008G214600 0.5kb upstream 0.5kb upstream 500 false Chr08: 56356499-56356998 Phaseolus vulgaris
Phvul.008G214600 0.5kb downstream 0.5kb downstream 4937 true Chr08: 56356999-56361935 Phaseolus vulgaris
Phvul.008G214600 0.5kb downstream 0.5kb downstream 500 false Chr08: 56361436-56361935 Phaseolus vulgaris
Phvul.008G214600 1.0kb upstream 1.0kb upstream 5437 true Chr08: 56355999-56361435 Phaseolus vulgaris
Phvul.008G214600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56355999-56356998 Phaseolus vulgaris
Phvul.008G214600 1.0kb downstream 1.0kb downstream 5437 true Chr08: 56356999-56362435 Phaseolus vulgaris
Phvul.008G214600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56361436-56362435 Phaseolus vulgaris
Phvul.008G214600 2.0kb upstream 2.0kb upstream 6437 true Chr08: 56354999-56361435 Phaseolus vulgaris
Phvul.008G214600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56354999-56356998 Phaseolus vulgaris
Phvul.008G214600 2.0kb downstream 2.0kb downstream 6437 true Chr08: 56356999-56363435 Phaseolus vulgaris
Phvul.008G214600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56361436-56363435 Phaseolus vulgaris
Phvul.008G214600 5.0kb upstream 5.0kb upstream 9437 true Chr08: 56351999-56361435 Phaseolus vulgaris
Phvul.008G214600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56351999-56356998 Phaseolus vulgaris
Phvul.008G214600 5.0kb downstream 5.0kb downstream 9437 true Chr08: 56356999-56366435 Phaseolus vulgaris
Phvul.008G214600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56361436-56366435 Phaseolus vulgaris
Phvul.008G214600 10.0kb upstream 10.0kb upstream 14437 true Chr08: 56346999-56361435 Phaseolus vulgaris
Phvul.008G214600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56346999-56356998 Phaseolus vulgaris
Phvul.008G214600 10.0kb downstream 10.0kb downstream 14437 true Chr08: 56356999-56371435 Phaseolus vulgaris
Phvul.008G214600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56361436-56371435 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306300 5265 Fabidae View MSA
124063144 5270 Rosid View MSA
123743724 5271 Pentapetalae View MSA
122789792 5272 Eudicot View MSA
122050864 5273 Angiosperm View MSA
121352088 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.92 0.0 70.1975    
cufflinks 17.4504 0.0 64.198    
cufflinks 10.3799 0.0 35.8748   Low
cufflinks 22.9244 0.0 79.6525    
cufflinks 22.4511 0.0 79.6663    
cufflinks 13.0053 0.0 54.6231   Low
cufflinks 19.316 0.0 68.1053    
cufflinks 26.5952 0.0 101.225   High
cufflinks 16.9123 0.0 60.2993    
cufflinks 25.5615 0.0 97.5657   High
cufflinks 22.5741 0.0 85.5763    

0 Strain