Gene : Phvul.008G217700 P. vulgaris v2.1
Genomic Order:  2216 Name:  ? Phvul.008G217700
Secondary Identifier:  ? PAC:37159025
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G217700 0.5kb upstream 0.5kb upstream 1176 true Chr08: 56700571-56701746 Phaseolus vulgaris
Phvul.008G217700 0.5kb upstream 0.5kb upstream 500 false Chr08: 56700571-56701070 Phaseolus vulgaris
Phvul.008G217700 0.5kb downstream 0.5kb downstream 1176 true Chr08: 56701071-56702246 Phaseolus vulgaris
Phvul.008G217700 0.5kb downstream 0.5kb downstream 500 false Chr08: 56701747-56702246 Phaseolus vulgaris
Phvul.008G217700 1.0kb upstream 1.0kb upstream 1676 true Chr08: 56700071-56701746 Phaseolus vulgaris
Phvul.008G217700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56700071-56701070 Phaseolus vulgaris
Phvul.008G217700 1.0kb downstream 1.0kb downstream 1676 true Chr08: 56701071-56702746 Phaseolus vulgaris
Phvul.008G217700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56701747-56702746 Phaseolus vulgaris
Phvul.008G217700 2.0kb upstream 2.0kb upstream 2676 true Chr08: 56699071-56701746 Phaseolus vulgaris
Phvul.008G217700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56699071-56701070 Phaseolus vulgaris
Phvul.008G217700 2.0kb downstream 2.0kb downstream 2676 true Chr08: 56701071-56703746 Phaseolus vulgaris
Phvul.008G217700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56701747-56703746 Phaseolus vulgaris
Phvul.008G217700 5.0kb upstream 5.0kb upstream 5676 true Chr08: 56696071-56701746 Phaseolus vulgaris
Phvul.008G217700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56696071-56701070 Phaseolus vulgaris
Phvul.008G217700 5.0kb downstream 5.0kb downstream 5676 true Chr08: 56701071-56706746 Phaseolus vulgaris
Phvul.008G217700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56701747-56706746 Phaseolus vulgaris
Phvul.008G217700 10.0kb upstream 10.0kb upstream 10676 true Chr08: 56691071-56701746 Phaseolus vulgaris
Phvul.008G217700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56691071-56701070 Phaseolus vulgaris
Phvul.008G217700 10.0kb downstream 10.0kb downstream 10676 true Chr08: 56701071-56711746 Phaseolus vulgaris
Phvul.008G217700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56701747-56711746 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305571 5265 Fabidae View MSA
124060649 5270 Rosid View MSA
123750767 5271 Pentapetalae View MSA
122796138 5272 Eudicot View MSA
122051041 5273 Angiosperm View MSA
121312263 5274 Embryophyte View MSA
123349452 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.20571 0.0 8.03393    
cufflinks 3.59363 0.0 12.5138    
cufflinks 12.2439 0.0 37.0362   High
cufflinks 7.3468 0.0 23.5084    
cufflinks 13.2968 0.0 39.9469   High
cufflinks 3.83005 0.0 13.2621    
cufflinks 1.76347 0.0 6.56345    
cufflinks 1.08391 0.0 4.20278   Low
cufflinks 0.835211 0.0 3.30529   Low
cufflinks 4.84561 0.0 16.3486    
cufflinks 11.2996 0.0 34.5957   High

0 Strain