Gene : Phvul.008G218100 P. vulgaris v2.1
Defline:  (1 of 2) K07342 - protein transport protein SEC61 subunit gamma and related proteins (SEC61G, SSS1, secE) Genomic Order:  2220
Name:  ? Phvul.008G218100 Secondary Identifier:  ? PAC:37159263
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G218100 0.5kb upstream 0.5kb upstream 2788 true Chr08: 56743296-56746083 Phaseolus vulgaris
Phvul.008G218100 0.5kb upstream 0.5kb upstream 500 false Chr08: 56743296-56743795 Phaseolus vulgaris
Phvul.008G218100 0.5kb downstream 0.5kb downstream 2788 true Chr08: 56743796-56746583 Phaseolus vulgaris
Phvul.008G218100 0.5kb downstream 0.5kb downstream 500 false Chr08: 56746084-56746583 Phaseolus vulgaris
Phvul.008G218100 1.0kb upstream 1.0kb upstream 3288 true Chr08: 56742796-56746083 Phaseolus vulgaris
Phvul.008G218100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56742796-56743795 Phaseolus vulgaris
Phvul.008G218100 1.0kb downstream 1.0kb downstream 3288 true Chr08: 56743796-56747083 Phaseolus vulgaris
Phvul.008G218100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56746084-56747083 Phaseolus vulgaris
Phvul.008G218100 2.0kb upstream 2.0kb upstream 4288 true Chr08: 56741796-56746083 Phaseolus vulgaris
Phvul.008G218100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56741796-56743795 Phaseolus vulgaris
Phvul.008G218100 2.0kb downstream 2.0kb downstream 4288 true Chr08: 56743796-56748083 Phaseolus vulgaris
Phvul.008G218100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56746084-56748083 Phaseolus vulgaris
Phvul.008G218100 5.0kb upstream 5.0kb upstream 7288 true Chr08: 56738796-56746083 Phaseolus vulgaris
Phvul.008G218100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56738796-56743795 Phaseolus vulgaris
Phvul.008G218100 5.0kb downstream 5.0kb downstream 7288 true Chr08: 56743796-56751083 Phaseolus vulgaris
Phvul.008G218100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56746084-56751083 Phaseolus vulgaris
Phvul.008G218100 10.0kb upstream 10.0kb upstream 12288 true Chr08: 56733796-56746083 Phaseolus vulgaris
Phvul.008G218100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56733796-56743795 Phaseolus vulgaris
Phvul.008G218100 10.0kb downstream 10.0kb downstream 12288 true Chr08: 56743796-56756083 Phaseolus vulgaris
Phvul.008G218100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56746084-56756083 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313003 5265 Fabidae View MSA
124065252 5270 Rosid View MSA
123752578 5271 Pentapetalae View MSA
122795924 5272 Eudicot View MSA
122042910 5273 Angiosperm View MSA
121349505 5274 Embryophyte View MSA
123424142 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.2256 0.0 92.1767 High  
cufflinks 44.3337 0.0 117.199 High  
cufflinks 39.1333 0.0 104.341 High  
cufflinks 84.359 0.0 218.136 High High
cufflinks 44.4486 0.0 118.201 High  
cufflinks 31.7536 0.0 86.0217    
cufflinks 27.1349 0.0 74.1893    
cufflinks 28.4168 0.0 77.258 High  
cufflinks 28.2986 0.0 77.1901    
cufflinks 18.9826 0.0 54.0928   Low
cufflinks 57.3844 0.0 149.707 High High

0 Strain