Gene : Phvul.008G223100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR34945:SF1 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN Genomic Order:  2270
Name:  ? Phvul.008G223100 Secondary Identifier:  ? PAC:37159922
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G223100 0.5kb upstream 0.5kb upstream 3351 true Chr08: 57255061-57258411 Phaseolus vulgaris
Phvul.008G223100 0.5kb upstream 0.5kb upstream 500 false Chr08: 57257912-57258411 Phaseolus vulgaris
Phvul.008G223100 0.5kb downstream 0.5kb downstream 3351 true Chr08: 57254561-57257911 Phaseolus vulgaris
Phvul.008G223100 0.5kb downstream 0.5kb downstream 500 false Chr08: 57254561-57255060 Phaseolus vulgaris
Phvul.008G223100 1.0kb upstream 1.0kb upstream 3851 true Chr08: 57255061-57258911 Phaseolus vulgaris
Phvul.008G223100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 57257912-57258911 Phaseolus vulgaris
Phvul.008G223100 1.0kb downstream 1.0kb downstream 3851 true Chr08: 57254061-57257911 Phaseolus vulgaris
Phvul.008G223100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 57254061-57255060 Phaseolus vulgaris
Phvul.008G223100 2.0kb upstream 2.0kb upstream 4851 true Chr08: 57255061-57259911 Phaseolus vulgaris
Phvul.008G223100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 57257912-57259911 Phaseolus vulgaris
Phvul.008G223100 2.0kb downstream 2.0kb downstream 4851 true Chr08: 57253061-57257911 Phaseolus vulgaris
Phvul.008G223100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 57253061-57255060 Phaseolus vulgaris
Phvul.008G223100 5.0kb upstream 5.0kb upstream 7851 true Chr08: 57255061-57262911 Phaseolus vulgaris
Phvul.008G223100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 57257912-57262911 Phaseolus vulgaris
Phvul.008G223100 5.0kb downstream 5.0kb downstream 7851 true Chr08: 57250061-57257911 Phaseolus vulgaris
Phvul.008G223100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 57250061-57255060 Phaseolus vulgaris
Phvul.008G223100 10.0kb upstream 10.0kb upstream 12851 true Chr08: 57255061-57267911 Phaseolus vulgaris
Phvul.008G223100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 57257912-57267911 Phaseolus vulgaris
Phvul.008G223100 10.0kb downstream 10.0kb downstream 12851 true Chr08: 57245061-57257911 Phaseolus vulgaris
Phvul.008G223100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 57245061-57255060 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299723 5265 Fabidae View MSA
124063750 5270 Rosid View MSA
123740513 5271 Pentapetalae View MSA
122786600 5272 Eudicot View MSA
122046716 5273 Angiosperm View MSA
121310645 5274 Embryophyte View MSA
123348077 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.0944 0.0 59.7337   High
cufflinks 15.6573 0.0 41.0448    
cufflinks 2.92347 0.0 8.99624   Low
cufflinks 2.43251 0.0 7.55243   Low
cufflinks 8.03475 0.0 22.0109    
cufflinks 7.72349 0.0 21.3551    
cufflinks 10.2426 0.0 27.4651    
cufflinks 13.7829 0.0 36.3845    
cufflinks 8.78345 0.0 23.8695    
cufflinks 7.07087 0.0 19.7264    
cufflinks 9.28148 0.0 25.1595    

0 Strain