Gene : Phvul.008G221700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR12585:SF26 - SISTER CHROMATID COHESION 1 PROTEIN 1 Genomic Order:  2256
Name:  ? Phvul.008G221700 Secondary Identifier:  ? PAC:37158831
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G221700 0.5kb upstream 0.5kb upstream 6660 true Chr08: 57064949-57071608 Phaseolus vulgaris
Phvul.008G221700 0.5kb upstream 0.5kb upstream 500 false Chr08: 57064949-57065448 Phaseolus vulgaris
Phvul.008G221700 0.5kb downstream 0.5kb downstream 6660 true Chr08: 57065449-57072108 Phaseolus vulgaris
Phvul.008G221700 0.5kb downstream 0.5kb downstream 500 false Chr08: 57071609-57072108 Phaseolus vulgaris
Phvul.008G221700 1.0kb upstream 1.0kb upstream 7160 true Chr08: 57064449-57071608 Phaseolus vulgaris
Phvul.008G221700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 57064449-57065448 Phaseolus vulgaris
Phvul.008G221700 1.0kb downstream 1.0kb downstream 7160 true Chr08: 57065449-57072608 Phaseolus vulgaris
Phvul.008G221700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 57071609-57072608 Phaseolus vulgaris
Phvul.008G221700 2.0kb upstream 2.0kb upstream 8160 true Chr08: 57063449-57071608 Phaseolus vulgaris
Phvul.008G221700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 57063449-57065448 Phaseolus vulgaris
Phvul.008G221700 2.0kb downstream 2.0kb downstream 8160 true Chr08: 57065449-57073608 Phaseolus vulgaris
Phvul.008G221700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 57071609-57073608 Phaseolus vulgaris
Phvul.008G221700 5.0kb upstream 5.0kb upstream 11160 true Chr08: 57060449-57071608 Phaseolus vulgaris
Phvul.008G221700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 57060449-57065448 Phaseolus vulgaris
Phvul.008G221700 5.0kb downstream 5.0kb downstream 11160 true Chr08: 57065449-57076608 Phaseolus vulgaris
Phvul.008G221700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 57071609-57076608 Phaseolus vulgaris
Phvul.008G221700 10.0kb upstream 10.0kb upstream 16160 true Chr08: 57055449-57071608 Phaseolus vulgaris
Phvul.008G221700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 57055449-57065448 Phaseolus vulgaris
Phvul.008G221700 10.0kb downstream 10.0kb downstream 16160 true Chr08: 57065449-57081608 Phaseolus vulgaris
Phvul.008G221700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 57071609-57081608 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312296 5265 Fabidae View MSA
124060947 5270 Rosid View MSA
123744806 5271 Pentapetalae View MSA
122792997 5272 Eudicot View MSA
122042862 5273 Angiosperm View MSA
121347788 5274 Embryophyte View MSA
123426470 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.663127 0.0 2.67743   Low
cufflinks 3.17643 0.0 10.5237    
cufflinks 4.71918 0.0 15.0268    
cufflinks 1.93844 0.0 6.46043    
cufflinks 3.52248 0.0 24.007    
cufflinks 7.44798 0.0 23.6344   High
cufflinks 2.32774 0.0 17.5439    
cufflinks 2.17263 0.0 22.1676    
cufflinks 1.97763 0.0 13.9265    
cufflinks 4.47314 0.0 14.2422    
cufflinks 3.2538 0.0 10.721    

0 Strain