Gene : Phvul.008G222700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR12565//PTHR12565:SF181 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2266
Name:  ? Phvul.008G222700 Secondary Identifier:  ? PAC:37160648
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G222700 0.5kb upstream 0.5kb upstream 2140 true Chr08: 57177865-57180004 Phaseolus vulgaris
Phvul.008G222700 0.5kb upstream 0.5kb upstream 500 false Chr08: 57179505-57180004 Phaseolus vulgaris
Phvul.008G222700 0.5kb downstream 0.5kb downstream 2140 true Chr08: 57177365-57179504 Phaseolus vulgaris
Phvul.008G222700 0.5kb downstream 0.5kb downstream 500 false Chr08: 57177365-57177864 Phaseolus vulgaris
Phvul.008G222700 1.0kb upstream 1.0kb upstream 2640 true Chr08: 57177865-57180504 Phaseolus vulgaris
Phvul.008G222700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 57179505-57180504 Phaseolus vulgaris
Phvul.008G222700 1.0kb downstream 1.0kb downstream 2640 true Chr08: 57176865-57179504 Phaseolus vulgaris
Phvul.008G222700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 57176865-57177864 Phaseolus vulgaris
Phvul.008G222700 2.0kb upstream 2.0kb upstream 3640 true Chr08: 57177865-57181504 Phaseolus vulgaris
Phvul.008G222700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 57179505-57181504 Phaseolus vulgaris
Phvul.008G222700 2.0kb downstream 2.0kb downstream 3640 true Chr08: 57175865-57179504 Phaseolus vulgaris
Phvul.008G222700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 57175865-57177864 Phaseolus vulgaris
Phvul.008G222700 5.0kb upstream 5.0kb upstream 6640 true Chr08: 57177865-57184504 Phaseolus vulgaris
Phvul.008G222700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 57179505-57184504 Phaseolus vulgaris
Phvul.008G222700 5.0kb downstream 5.0kb downstream 6640 true Chr08: 57172865-57179504 Phaseolus vulgaris
Phvul.008G222700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 57172865-57177864 Phaseolus vulgaris
Phvul.008G222700 10.0kb upstream 10.0kb upstream 11640 true Chr08: 57177865-57189504 Phaseolus vulgaris
Phvul.008G222700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 57179505-57189504 Phaseolus vulgaris
Phvul.008G222700 10.0kb downstream 10.0kb downstream 11640 true Chr08: 57167865-57179504 Phaseolus vulgaris
Phvul.008G222700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 57167865-57177864 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254606 5265 Fabidae View MSA
124063256 5270 Rosid View MSA
123736392 5271 Pentapetalae View MSA
122786016 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.87246 0.0 12.4866    
cufflinks 10.2633 0.0 29.5266    
cufflinks 5.36273 0.0 16.5739    
cufflinks 2.54783 0.0 8.61244    
cufflinks 26.5011 0.0 70.608   High
cufflinks 3.21877 0.0 10.5567    
cufflinks 1.8896 0.0 6.57566    
cufflinks 0.668627 0.0 2.54977   Low
cufflinks 2.80695 0.0 9.31265    
cufflinks 4.34904 0.0 13.8543    
cufflinks 18.9901 0.0 51.7872   High

0 Strain