Gene : Phvul.008G205500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24056:SF227 - CYCLIN-DEPENDENT KINASE C-2 Genomic Order:  2095
Name:  ? Phvul.008G205500 Secondary Identifier:  ? PAC:37160645
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G205500 0.5kb upstream 0.5kb upstream 5598 true Chr08: 55294498-55300095 Phaseolus vulgaris
Phvul.008G205500 0.5kb upstream 0.5kb upstream 500 false Chr08: 55294498-55294997 Phaseolus vulgaris
Phvul.008G205500 0.5kb downstream 0.5kb downstream 5598 true Chr08: 55294998-55300595 Phaseolus vulgaris
Phvul.008G205500 0.5kb downstream 0.5kb downstream 500 false Chr08: 55300096-55300595 Phaseolus vulgaris
Phvul.008G205500 1.0kb upstream 1.0kb upstream 6098 true Chr08: 55293998-55300095 Phaseolus vulgaris
Phvul.008G205500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55293998-55294997 Phaseolus vulgaris
Phvul.008G205500 1.0kb downstream 1.0kb downstream 6098 true Chr08: 55294998-55301095 Phaseolus vulgaris
Phvul.008G205500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55300096-55301095 Phaseolus vulgaris
Phvul.008G205500 2.0kb upstream 2.0kb upstream 7098 true Chr08: 55292998-55300095 Phaseolus vulgaris
Phvul.008G205500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55292998-55294997 Phaseolus vulgaris
Phvul.008G205500 2.0kb downstream 2.0kb downstream 7098 true Chr08: 55294998-55302095 Phaseolus vulgaris
Phvul.008G205500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55300096-55302095 Phaseolus vulgaris
Phvul.008G205500 5.0kb upstream 5.0kb upstream 10098 true Chr08: 55289998-55300095 Phaseolus vulgaris
Phvul.008G205500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55289998-55294997 Phaseolus vulgaris
Phvul.008G205500 5.0kb downstream 5.0kb downstream 10098 true Chr08: 55294998-55305095 Phaseolus vulgaris
Phvul.008G205500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55300096-55305095 Phaseolus vulgaris
Phvul.008G205500 10.0kb upstream 10.0kb upstream 15098 true Chr08: 55284998-55300095 Phaseolus vulgaris
Phvul.008G205500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55284998-55294997 Phaseolus vulgaris
Phvul.008G205500 10.0kb downstream 10.0kb downstream 15098 true Chr08: 55294998-55310095 Phaseolus vulgaris
Phvul.008G205500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55300096-55310095 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316538 5265 Fabidae View MSA
124061566 5270 Rosid View MSA
123744751 5271 Pentapetalae View MSA
122788192 5272 Eudicot View MSA
122043728 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121346780 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6447 0.0 27.949    
cufflinks 11.103 0.0 29.0866    
cufflinks 14.3212 0.0 37.1594   High
cufflinks 9.87313 0.0 26.1549    
cufflinks 12.6355 0.0 32.9797    
cufflinks 9.95318 0.0 26.2247    
cufflinks 10.0427 0.0 26.3869    
cufflinks 12.1947 0.0 31.7214    
cufflinks 10.2685 0.0 26.9757    
cufflinks 16.8128 0.0 43.4997   High
cufflinks 12.3278 0.0 32.1886    

0 Strain