Gene : Phvul.008G204800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11595:SF24 - ELONGATION FACTOR 1-BETA 1-RELATED Genomic Order:  2088
Name:  ? Phvul.008G204800 Secondary Identifier:  ? PAC:37157640
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G204800 0.5kb upstream 0.5kb upstream 3624 true Chr08: 55240405-55244028 Phaseolus vulgaris
Phvul.008G204800 0.5kb upstream 0.5kb upstream 500 false Chr08: 55243529-55244028 Phaseolus vulgaris
Phvul.008G204800 0.5kb downstream 0.5kb downstream 3624 true Chr08: 55239905-55243528 Phaseolus vulgaris
Phvul.008G204800 0.5kb downstream 0.5kb downstream 500 false Chr08: 55239905-55240404 Phaseolus vulgaris
Phvul.008G204800 1.0kb upstream 1.0kb upstream 4124 true Chr08: 55240405-55244528 Phaseolus vulgaris
Phvul.008G204800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55243529-55244528 Phaseolus vulgaris
Phvul.008G204800 1.0kb downstream 1.0kb downstream 4124 true Chr08: 55239405-55243528 Phaseolus vulgaris
Phvul.008G204800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55239405-55240404 Phaseolus vulgaris
Phvul.008G204800 2.0kb upstream 2.0kb upstream 5124 true Chr08: 55240405-55245528 Phaseolus vulgaris
Phvul.008G204800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55243529-55245528 Phaseolus vulgaris
Phvul.008G204800 2.0kb downstream 2.0kb downstream 5124 true Chr08: 55238405-55243528 Phaseolus vulgaris
Phvul.008G204800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55238405-55240404 Phaseolus vulgaris
Phvul.008G204800 5.0kb upstream 5.0kb upstream 8124 true Chr08: 55240405-55248528 Phaseolus vulgaris
Phvul.008G204800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55243529-55248528 Phaseolus vulgaris
Phvul.008G204800 5.0kb downstream 5.0kb downstream 8124 true Chr08: 55235405-55243528 Phaseolus vulgaris
Phvul.008G204800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55235405-55240404 Phaseolus vulgaris
Phvul.008G204800 10.0kb upstream 10.0kb upstream 13124 true Chr08: 55240405-55253528 Phaseolus vulgaris
Phvul.008G204800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55243529-55253528 Phaseolus vulgaris
Phvul.008G204800 10.0kb downstream 10.0kb downstream 13124 true Chr08: 55230405-55243528 Phaseolus vulgaris
Phvul.008G204800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55230405-55240404 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308515 5265 Fabidae View MSA
124069171 5270 Rosid View MSA
123737749 5271 Pentapetalae View MSA
122793737 5272 Eudicot View MSA
122043548 5273 Angiosperm View MSA
121344333 5274 Embryophyte View MSA
123425760 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 113.665 0.0 310.394 High  
cufflinks 166.518 0.0 472.791 High High
cufflinks 102.026 0.0 276.113 High  
cufflinks 206.284 0.0 597.274 High High
cufflinks 148.37 0.0 413.467 High  
cufflinks 66.8419 0.0 175.267 High Low
cufflinks 83.3001 0.0 221.513 High  
cufflinks 92.2833 0.0 247.36 High  
cufflinks 154.301 0.0 433.842 High  
cufflinks 80.3782 0.0 212.665 High Low
cufflinks 129.518 0.0 356.241 High  

0 Strain