Gene : Phvul.008G204500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10252:SF36 - HISTONE SUPERFAMILY PROTEIN Genomic Order:  2085
Name:  ? Phvul.008G204500 Secondary Identifier:  ? PAC:37160636
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G204500 0.5kb upstream 0.5kb upstream 4131 true Chr08: 55219751-55223881 Phaseolus vulgaris
Phvul.008G204500 0.5kb upstream 0.5kb upstream 500 false Chr08: 55223382-55223881 Phaseolus vulgaris
Phvul.008G204500 0.5kb downstream 0.5kb downstream 4131 true Chr08: 55219251-55223381 Phaseolus vulgaris
Phvul.008G204500 0.5kb downstream 0.5kb downstream 500 false Chr08: 55219251-55219750 Phaseolus vulgaris
Phvul.008G204500 1.0kb upstream 1.0kb upstream 4631 true Chr08: 55219751-55224381 Phaseolus vulgaris
Phvul.008G204500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55223382-55224381 Phaseolus vulgaris
Phvul.008G204500 1.0kb downstream 1.0kb downstream 4631 true Chr08: 55218751-55223381 Phaseolus vulgaris
Phvul.008G204500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55218751-55219750 Phaseolus vulgaris
Phvul.008G204500 2.0kb upstream 2.0kb upstream 5631 true Chr08: 55219751-55225381 Phaseolus vulgaris
Phvul.008G204500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55223382-55225381 Phaseolus vulgaris
Phvul.008G204500 2.0kb downstream 2.0kb downstream 5631 true Chr08: 55217751-55223381 Phaseolus vulgaris
Phvul.008G204500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55217751-55219750 Phaseolus vulgaris
Phvul.008G204500 5.0kb upstream 5.0kb upstream 8631 true Chr08: 55219751-55228381 Phaseolus vulgaris
Phvul.008G204500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55223382-55228381 Phaseolus vulgaris
Phvul.008G204500 5.0kb downstream 5.0kb downstream 8631 true Chr08: 55214751-55223381 Phaseolus vulgaris
Phvul.008G204500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55214751-55219750 Phaseolus vulgaris
Phvul.008G204500 10.0kb upstream 10.0kb upstream 13631 true Chr08: 55219751-55233381 Phaseolus vulgaris
Phvul.008G204500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55223382-55233381 Phaseolus vulgaris
Phvul.008G204500 10.0kb downstream 10.0kb downstream 13631 true Chr08: 55209751-55223381 Phaseolus vulgaris
Phvul.008G204500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55209751-55219750 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296525 5265 Fabidae View MSA
124069286 5270 Rosid View MSA
123742462 5271 Pentapetalae View MSA
122792661 5272 Eudicot View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.782653 0.0 3.41241    
cufflinks 1.11082 0.0 4.41434    
cufflinks 0.282815 0.0 2.69425 Low Low
cufflinks 0.569334 0.0 2.71711    
cufflinks 0.589439 0.0 3.57701 Low  
cufflinks 0.932925 0.0 3.99639    
cufflinks 3.89745 0.0 12.6738   High
cufflinks 3.8698 0.0 12.2188   High
cufflinks 1.62831 0.0 6.33056    
cufflinks 0.96953 0.0 4.91218    
cufflinks 0.979356 0.0 5.01561    

0 Strain