Gene : Phvul.008G204700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22763//PTHR22763:SF24 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2087
Name:  ? Phvul.008G204700 Secondary Identifier:  ? PAC:37159797
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G204700 0.5kb upstream 0.5kb upstream 3185 true Chr08: 55235011-55238195 Phaseolus vulgaris
Phvul.008G204700 0.5kb upstream 0.5kb upstream 500 false Chr08: 55237696-55238195 Phaseolus vulgaris
Phvul.008G204700 0.5kb downstream 0.5kb downstream 3185 true Chr08: 55234511-55237695 Phaseolus vulgaris
Phvul.008G204700 0.5kb downstream 0.5kb downstream 500 false Chr08: 55234511-55235010 Phaseolus vulgaris
Phvul.008G204700 1.0kb upstream 1.0kb upstream 3685 true Chr08: 55235011-55238695 Phaseolus vulgaris
Phvul.008G204700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55237696-55238695 Phaseolus vulgaris
Phvul.008G204700 1.0kb downstream 1.0kb downstream 3685 true Chr08: 55234011-55237695 Phaseolus vulgaris
Phvul.008G204700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55234011-55235010 Phaseolus vulgaris
Phvul.008G204700 2.0kb upstream 2.0kb upstream 4685 true Chr08: 55235011-55239695 Phaseolus vulgaris
Phvul.008G204700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55237696-55239695 Phaseolus vulgaris
Phvul.008G204700 2.0kb downstream 2.0kb downstream 4685 true Chr08: 55233011-55237695 Phaseolus vulgaris
Phvul.008G204700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55233011-55235010 Phaseolus vulgaris
Phvul.008G204700 5.0kb upstream 5.0kb upstream 7685 true Chr08: 55235011-55242695 Phaseolus vulgaris
Phvul.008G204700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55237696-55242695 Phaseolus vulgaris
Phvul.008G204700 5.0kb downstream 5.0kb downstream 7685 true Chr08: 55230011-55237695 Phaseolus vulgaris
Phvul.008G204700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55230011-55235010 Phaseolus vulgaris
Phvul.008G204700 10.0kb upstream 10.0kb upstream 12685 true Chr08: 55235011-55247695 Phaseolus vulgaris
Phvul.008G204700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55237696-55247695 Phaseolus vulgaris
Phvul.008G204700 10.0kb downstream 10.0kb downstream 12685 true Chr08: 55225011-55237695 Phaseolus vulgaris
Phvul.008G204700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55225011-55235010 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311053 5265 Fabidae View MSA
124070952 5270 Rosid View MSA
123745999 5271 Pentapetalae View MSA
122790564 5272 Eudicot View MSA
122048435 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7514 0.0 46.4664    
cufflinks 11.1125 0.0 38.9921    
cufflinks 23.9722 0.0 76.3687   High
cufflinks 11.3034 0.0 39.8103    
cufflinks 19.1086 0.0 62.1884   High
cufflinks 14.348 0.0 48.0545    
cufflinks 10.3834 0.0 31.7447    
cufflinks 9.72294 0.0 34.6265   Low
cufflinks 9.72216 0.0 34.8939   Low
cufflinks 14.546 0.0 48.9352    
cufflinks 16.711 0.0 55.1094    

0 Strain