Gene : Phvul.008G206600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Genomic Order:  2106
Name:  ? Phvul.008G206600 Secondary Identifier:  ? PAC:37158420
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G206600 0.5kb upstream 0.5kb upstream 8319 true Chr08: 55451810-55460128 Phaseolus vulgaris
Phvul.008G206600 0.5kb upstream 0.5kb upstream 500 false Chr08: 55459629-55460128 Phaseolus vulgaris
Phvul.008G206600 0.5kb downstream 0.5kb downstream 8319 true Chr08: 55451310-55459628 Phaseolus vulgaris
Phvul.008G206600 0.5kb downstream 0.5kb downstream 500 false Chr08: 55451310-55451809 Phaseolus vulgaris
Phvul.008G206600 1.0kb upstream 1.0kb upstream 8819 true Chr08: 55451810-55460628 Phaseolus vulgaris
Phvul.008G206600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55459629-55460628 Phaseolus vulgaris
Phvul.008G206600 1.0kb downstream 1.0kb downstream 8819 true Chr08: 55450810-55459628 Phaseolus vulgaris
Phvul.008G206600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55450810-55451809 Phaseolus vulgaris
Phvul.008G206600 2.0kb upstream 2.0kb upstream 9819 true Chr08: 55451810-55461628 Phaseolus vulgaris
Phvul.008G206600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55459629-55461628 Phaseolus vulgaris
Phvul.008G206600 2.0kb downstream 2.0kb downstream 9819 true Chr08: 55449810-55459628 Phaseolus vulgaris
Phvul.008G206600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55449810-55451809 Phaseolus vulgaris
Phvul.008G206600 5.0kb upstream 5.0kb upstream 12819 true Chr08: 55451810-55464628 Phaseolus vulgaris
Phvul.008G206600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55459629-55464628 Phaseolus vulgaris
Phvul.008G206600 5.0kb downstream 5.0kb downstream 12819 true Chr08: 55446810-55459628 Phaseolus vulgaris
Phvul.008G206600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55446810-55451809 Phaseolus vulgaris
Phvul.008G206600 10.0kb upstream 10.0kb upstream 17819 true Chr08: 55451810-55469628 Phaseolus vulgaris
Phvul.008G206600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55459629-55469628 Phaseolus vulgaris
Phvul.008G206600 10.0kb downstream 10.0kb downstream 17819 true Chr08: 55441810-55459628 Phaseolus vulgaris
Phvul.008G206600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55441810-55451809 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309915 5265 Fabidae View MSA
124060995 5270 Rosid View MSA
123750944 5271 Pentapetalae View MSA
122796647 5272 Eudicot View MSA
122050518 5273 Angiosperm View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.71661 0.0 12.2364   Low
cufflinks 12.8279 0.0 45.3887   High
cufflinks 2.06548 0.0 10.0283   Low
cufflinks 4.93099 0.0 20.1724    
cufflinks 4.39051 0.0 16.2164    
cufflinks 2.90285 0.0 12.9431    
cufflinks 6.23771 0.0 21.1596    
cufflinks 11.3654 0.0 39.9335   High
cufflinks 4.62985 0.0 16.7701    
cufflinks 12.3966 0.0 43.6088   High
cufflinks 5.73832 0.0 20.4971    

0 Strain