Gene : Phvul.008G206900 P. vulgaris v2.1
Defline:  (1 of 3) K00423 - L-ascorbate oxidase (E1.10.3.3) Genomic Order:  2109
Name:  ? Phvul.008G206900 Secondary Identifier:  ? PAC:37158732
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G206900 0.5kb upstream 0.5kb upstream 6373 true Chr08: 55482025-55488397 Phaseolus vulgaris
Phvul.008G206900 0.5kb upstream 0.5kb upstream 500 false Chr08: 55482025-55482524 Phaseolus vulgaris
Phvul.008G206900 0.5kb downstream 0.5kb downstream 6373 true Chr08: 55482525-55488897 Phaseolus vulgaris
Phvul.008G206900 0.5kb downstream 0.5kb downstream 500 false Chr08: 55488398-55488897 Phaseolus vulgaris
Phvul.008G206900 1.0kb upstream 1.0kb upstream 6873 true Chr08: 55481525-55488397 Phaseolus vulgaris
Phvul.008G206900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55481525-55482524 Phaseolus vulgaris
Phvul.008G206900 1.0kb downstream 1.0kb downstream 6873 true Chr08: 55482525-55489397 Phaseolus vulgaris
Phvul.008G206900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55488398-55489397 Phaseolus vulgaris
Phvul.008G206900 2.0kb upstream 2.0kb upstream 7873 true Chr08: 55480525-55488397 Phaseolus vulgaris
Phvul.008G206900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55480525-55482524 Phaseolus vulgaris
Phvul.008G206900 2.0kb downstream 2.0kb downstream 7873 true Chr08: 55482525-55490397 Phaseolus vulgaris
Phvul.008G206900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55488398-55490397 Phaseolus vulgaris
Phvul.008G206900 5.0kb upstream 5.0kb upstream 10873 true Chr08: 55477525-55488397 Phaseolus vulgaris
Phvul.008G206900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55477525-55482524 Phaseolus vulgaris
Phvul.008G206900 5.0kb downstream 5.0kb downstream 10873 true Chr08: 55482525-55493397 Phaseolus vulgaris
Phvul.008G206900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55488398-55493397 Phaseolus vulgaris
Phvul.008G206900 10.0kb upstream 10.0kb upstream 15873 true Chr08: 55472525-55488397 Phaseolus vulgaris
Phvul.008G206900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55472525-55482524 Phaseolus vulgaris
Phvul.008G206900 10.0kb downstream 10.0kb downstream 15873 true Chr08: 55482525-55498397 Phaseolus vulgaris
Phvul.008G206900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55488398-55498397 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254046 5265 Fabidae View MSA
124063404 5270 Rosid View MSA
123739714 5271 Pentapetalae View MSA
122791263 5272 Eudicot View MSA
122042920 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0405669 0.0 0.186725 Low  
cufflinks 0.132188 0.0 0.544482 Low  
cufflinks 0.237118 0.0 0.92991 Low  
cufflinks 0.039723 0.0 0.184519 Low  
cufflinks 0.322053 0.0 1.24344 Low High
cufflinks 0.231072 0.0 0.90964 Low  
cufflinks 0.0442538 0.0 0.201487 Low  
cufflinks 0.281237 0.0 1.08562 Low High
cufflinks 0.0240529 0.0 0.116828 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.128404 0.0 0.533043 Low  

0 Strain