Gene : Phvul.008G206500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Genomic Order:  2105
Name:  ? Phvul.008G206500 Secondary Identifier:  ? PAC:37158233
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G206500 0.5kb upstream 0.5kb upstream 7245 true Chr08: 55428446-55435690 Phaseolus vulgaris
Phvul.008G206500 0.5kb upstream 0.5kb upstream 500 false Chr08: 55435191-55435690 Phaseolus vulgaris
Phvul.008G206500 0.5kb downstream 0.5kb downstream 7245 true Chr08: 55427946-55435190 Phaseolus vulgaris
Phvul.008G206500 0.5kb downstream 0.5kb downstream 500 false Chr08: 55427946-55428445 Phaseolus vulgaris
Phvul.008G206500 1.0kb upstream 1.0kb upstream 7745 true Chr08: 55428446-55436190 Phaseolus vulgaris
Phvul.008G206500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55435191-55436190 Phaseolus vulgaris
Phvul.008G206500 1.0kb downstream 1.0kb downstream 7745 true Chr08: 55427446-55435190 Phaseolus vulgaris
Phvul.008G206500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55427446-55428445 Phaseolus vulgaris
Phvul.008G206500 2.0kb upstream 2.0kb upstream 8745 true Chr08: 55428446-55437190 Phaseolus vulgaris
Phvul.008G206500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55435191-55437190 Phaseolus vulgaris
Phvul.008G206500 2.0kb downstream 2.0kb downstream 8745 true Chr08: 55426446-55435190 Phaseolus vulgaris
Phvul.008G206500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55426446-55428445 Phaseolus vulgaris
Phvul.008G206500 5.0kb upstream 5.0kb upstream 11745 true Chr08: 55428446-55440190 Phaseolus vulgaris
Phvul.008G206500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55435191-55440190 Phaseolus vulgaris
Phvul.008G206500 5.0kb downstream 5.0kb downstream 11745 true Chr08: 55423446-55435190 Phaseolus vulgaris
Phvul.008G206500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55423446-55428445 Phaseolus vulgaris
Phvul.008G206500 10.0kb upstream 10.0kb upstream 16745 true Chr08: 55428446-55445190 Phaseolus vulgaris
Phvul.008G206500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55435191-55445190 Phaseolus vulgaris
Phvul.008G206500 10.0kb downstream 10.0kb downstream 16745 true Chr08: 55418446-55435190 Phaseolus vulgaris
Phvul.008G206500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55418446-55428445 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309915 5265 Fabidae View MSA
124060995 5270 Rosid View MSA
123750944 5271 Pentapetalae View MSA
122796647 5272 Eudicot View MSA
122050518 5273 Angiosperm View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.45809 0.0 14.6331   Low
cufflinks 22.0498 0.0 57.5976   High
cufflinks 10.1856 0.0 26.4115    
cufflinks 8.96736 0.0 23.4517    
cufflinks 8.86955 0.0 23.1843    
cufflinks 15.148 0.0 39.1792    
cufflinks 11.8158 0.0 30.5662    
cufflinks 17.0869 0.0 44.318   High
cufflinks 10.5816 0.0 27.4478    
cufflinks 16.2745 0.0 42.1205    
cufflinks 9.3922 0.0 24.4679    

0 Strain