Gene : Phvul.008G209100 P. vulgaris v2.1
Defline:  (1 of 1) K06961 - ribosomal RNA assembly protein (KRR1) Genomic Order:  2132
Name:  ? Phvul.008G209100 Secondary Identifier:  ? PAC:37161151
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G209100 0.5kb upstream 0.5kb upstream 4224 true Chr08: 55663433-55667656 Phaseolus vulgaris
Phvul.008G209100 0.5kb upstream 0.5kb upstream 500 false Chr08: 55667157-55667656 Phaseolus vulgaris
Phvul.008G209100 0.5kb downstream 0.5kb downstream 4224 true Chr08: 55662933-55667156 Phaseolus vulgaris
Phvul.008G209100 0.5kb downstream 0.5kb downstream 500 false Chr08: 55662933-55663432 Phaseolus vulgaris
Phvul.008G209100 1.0kb upstream 1.0kb upstream 4724 true Chr08: 55663433-55668156 Phaseolus vulgaris
Phvul.008G209100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55667157-55668156 Phaseolus vulgaris
Phvul.008G209100 1.0kb downstream 1.0kb downstream 4724 true Chr08: 55662433-55667156 Phaseolus vulgaris
Phvul.008G209100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55662433-55663432 Phaseolus vulgaris
Phvul.008G209100 2.0kb upstream 2.0kb upstream 5724 true Chr08: 55663433-55669156 Phaseolus vulgaris
Phvul.008G209100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55667157-55669156 Phaseolus vulgaris
Phvul.008G209100 2.0kb downstream 2.0kb downstream 5724 true Chr08: 55661433-55667156 Phaseolus vulgaris
Phvul.008G209100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55661433-55663432 Phaseolus vulgaris
Phvul.008G209100 5.0kb upstream 5.0kb upstream 8724 true Chr08: 55663433-55672156 Phaseolus vulgaris
Phvul.008G209100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55667157-55672156 Phaseolus vulgaris
Phvul.008G209100 5.0kb downstream 5.0kb downstream 8724 true Chr08: 55658433-55667156 Phaseolus vulgaris
Phvul.008G209100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55658433-55663432 Phaseolus vulgaris
Phvul.008G209100 10.0kb upstream 10.0kb upstream 13724 true Chr08: 55663433-55677156 Phaseolus vulgaris
Phvul.008G209100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55667157-55677156 Phaseolus vulgaris
Phvul.008G209100 10.0kb downstream 10.0kb downstream 13724 true Chr08: 55653433-55667156 Phaseolus vulgaris
Phvul.008G209100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55653433-55663432 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304580 5265 Fabidae View MSA
124064553 5270 Rosid View MSA
123738984 5271 Pentapetalae View MSA
122790120 5272 Eudicot View MSA
122041852 5273 Angiosperm View MSA
121344485 5274 Embryophyte View MSA
123424552 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.897 0.0 44.2977    
cufflinks 22.9545 0.0 59.4953   High
cufflinks 16.5731 0.0 43.476    
cufflinks 11.303 0.0 30.5571   Low
cufflinks 14.5505 0.0 38.7673    
cufflinks 12.9453 0.0 34.4764   Low
cufflinks 17.7974 0.0 46.4375    
cufflinks 21.1101 0.0 54.7306   High
cufflinks 20.3788 0.0 52.9169    
cufflinks 18.6503 0.0 48.7278    
cufflinks 15.7859 0.0 41.6698    

0 Strain