Gene : Phvul.008G210000 P. vulgaris v2.1
Defline:  (1 of 2) 1.2.3.1 - Aldehyde oxidase / Retinal oxidase Genomic Order:  2138
Name:  ? Phvul.008G210000 Secondary Identifier:  ? PAC:37160048
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G210000 0.5kb upstream 0.5kb upstream 8937 true Chr08: 55808303-55817239 Phaseolus vulgaris
Phvul.008G210000 0.5kb upstream 0.5kb upstream 500 false Chr08: 55808303-55808802 Phaseolus vulgaris
Phvul.008G210000 0.5kb downstream 0.5kb downstream 8937 true Chr08: 55808803-55817739 Phaseolus vulgaris
Phvul.008G210000 0.5kb downstream 0.5kb downstream 500 false Chr08: 55817240-55817739 Phaseolus vulgaris
Phvul.008G210000 1.0kb upstream 1.0kb upstream 9437 true Chr08: 55807803-55817239 Phaseolus vulgaris
Phvul.008G210000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55807803-55808802 Phaseolus vulgaris
Phvul.008G210000 1.0kb downstream 1.0kb downstream 9437 true Chr08: 55808803-55818239 Phaseolus vulgaris
Phvul.008G210000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55817240-55818239 Phaseolus vulgaris
Phvul.008G210000 2.0kb upstream 2.0kb upstream 10437 true Chr08: 55806803-55817239 Phaseolus vulgaris
Phvul.008G210000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55806803-55808802 Phaseolus vulgaris
Phvul.008G210000 2.0kb downstream 2.0kb downstream 10437 true Chr08: 55808803-55819239 Phaseolus vulgaris
Phvul.008G210000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55817240-55819239 Phaseolus vulgaris
Phvul.008G210000 5.0kb upstream 5.0kb upstream 13437 true Chr08: 55803803-55817239 Phaseolus vulgaris
Phvul.008G210000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55803803-55808802 Phaseolus vulgaris
Phvul.008G210000 5.0kb downstream 5.0kb downstream 13437 true Chr08: 55808803-55822239 Phaseolus vulgaris
Phvul.008G210000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55817240-55822239 Phaseolus vulgaris
Phvul.008G210000 10.0kb upstream 10.0kb upstream 18437 true Chr08: 55798803-55817239 Phaseolus vulgaris
Phvul.008G210000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55798803-55808802 Phaseolus vulgaris
Phvul.008G210000 10.0kb downstream 10.0kb downstream 18437 true Chr08: 55808803-55827239 Phaseolus vulgaris
Phvul.008G210000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55817240-55827239 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311295 5265 Fabidae View MSA
124064752 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.964486 0.0 3.01533    
cufflinks 1.39448 0.0 4.18009    
cufflinks 1.6578 0.0 4.85462    
cufflinks 0.554181 0.0 1.86714 Low Low
cufflinks 2.64593 0.0 7.46107    
cufflinks 1.4193 0.0 4.24262    
cufflinks 1.9373 0.0 5.6058    
cufflinks 1.28314 0.0 3.86433    
cufflinks 1.9994 0.0 5.7795    
cufflinks 6.09853 0.0 16.0089   High
cufflinks 1.25832 0.0 3.8437    

0 Strain