Gene : Phvul.008G207800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11695//PTHR11695:SF490 - ALCOHOL DEHYDROGENASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  2118
Name:  ? Phvul.008G207800 Secondary Identifier:  ? PAC:37160071
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5486 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6333 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-21 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-389 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6802 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G207800 0.5kb upstream 0.5kb upstream 3625 true Chr08: 55561560-55565184 Phaseolus vulgaris
Phvul.008G207800 0.5kb upstream 0.5kb upstream 500 false Chr08: 55561560-55562059 Phaseolus vulgaris
Phvul.008G207800 0.5kb downstream 0.5kb downstream 3625 true Chr08: 55562060-55565684 Phaseolus vulgaris
Phvul.008G207800 0.5kb downstream 0.5kb downstream 500 false Chr08: 55565185-55565684 Phaseolus vulgaris
Phvul.008G207800 1.0kb upstream 1.0kb upstream 4125 true Chr08: 55561060-55565184 Phaseolus vulgaris
Phvul.008G207800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55561060-55562059 Phaseolus vulgaris
Phvul.008G207800 1.0kb downstream 1.0kb downstream 4125 true Chr08: 55562060-55566184 Phaseolus vulgaris
Phvul.008G207800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55565185-55566184 Phaseolus vulgaris
Phvul.008G207800 2.0kb upstream 2.0kb upstream 5125 true Chr08: 55560060-55565184 Phaseolus vulgaris
Phvul.008G207800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55560060-55562059 Phaseolus vulgaris
Phvul.008G207800 2.0kb downstream 2.0kb downstream 5125 true Chr08: 55562060-55567184 Phaseolus vulgaris
Phvul.008G207800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55565185-55567184 Phaseolus vulgaris
Phvul.008G207800 5.0kb upstream 5.0kb upstream 8125 true Chr08: 55557060-55565184 Phaseolus vulgaris
Phvul.008G207800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55557060-55562059 Phaseolus vulgaris
Phvul.008G207800 5.0kb downstream 5.0kb downstream 8125 true Chr08: 55562060-55570184 Phaseolus vulgaris
Phvul.008G207800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55565185-55570184 Phaseolus vulgaris
Phvul.008G207800 10.0kb upstream 10.0kb upstream 13125 true Chr08: 55552060-55565184 Phaseolus vulgaris
Phvul.008G207800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55552060-55562059 Phaseolus vulgaris
Phvul.008G207800 10.0kb downstream 10.0kb downstream 13125 true Chr08: 55562060-55575184 Phaseolus vulgaris
Phvul.008G207800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55565185-55575184 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310727 5265 Fabidae View MSA
124072751 5270 Rosid View MSA
123744522 5271 Pentapetalae View MSA
122796931 5272 Eudicot View MSA
122046886 5273 Angiosperm View MSA
121310668 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.22009 0.0 4.14911    
cufflinks 10.726 0.0 28.9792   High
cufflinks 3.39537 0.0 10.258    
cufflinks 8.23627 0.0 22.9972    
cufflinks 4.82976 0.0 14.1677    
cufflinks 10.6892 0.0 28.8688   High
cufflinks 1.01061 0.0 3.51685    
cufflinks 0.567856 0.0 2.08025   Low
cufflinks 0.732358 0.0 2.63994   Low
cufflinks 2.78578 0.0 8.65349    
cufflinks 7.91829 0.0 22.0573    

0 Strain